6 homologs were found in PanDaTox collection
for query gene Ssed_2343 on replicon NC_009831
Organism: Shewanella sediminis HAW-EB3



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009092  Shew_2294  hypothetical protein  62.33 
 
 		 735 aa  898    Shewanella loihica PV-4  Bacteria  normal  0.922651  normal  1 
 
 
-
 
NC_009831  Ssed_2343  hypothetical protein  100 
 
 		 677 aa  1408    Shewanella sediminis HAW-EB3  Bacteria  normal  0.266376  decreased coverage  0.000000338267 
 
 
-
 
NC_009901  Spea_1627  hypothetical protein  69.66 
 
 		 692 aa  957    Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
-
 
NC_013061  Phep_1705  hypothetical protein  47.26 
 
 		 706 aa  591  1e-167  Pedobacter heparinus DSM 2366  Bacteria  normal  0.410139  hitchhiker  0.00605437 
 
 
-
 
NC_009767  Rcas_2170  Amylo-alpha-16-glucosidase  21.85 
 
 		 676 aa  55.8  0.000003  Roseiflexus castenholzii DSM 13941  Bacteria  unclonable  0.0000556903  unclonable  0.00000000115329 
 
 
-
 
NC_009523  RoseRS_1790  Amylo-alpha-1,6-glucosidase  20.97 
 
 		 676 aa  51.2  0.00007  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  0.0378432 
 
 
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