| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2170 |
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| Symbol | |
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| ID | 5539651 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2788758 |
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| End bp | 2790788 |
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| Gene Length | 2031 bp |
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| Protein Length | 676 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640894304 |
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| Product | Amylo-alpha-16-glucosidase |
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| Protein accession | YP_001432272 |
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| Protein GI | 156742143 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3408] Glycogen debranching enzyme |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000556903 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000000115329 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | GTGACTCTTC AACGTTATTT TGTTGATGAT CACGTCTGGG AAGCGGAAGT CGAACCAACG
ACGCCAGTCT TCCTCAGTGG GAAGCGCATC TATGCCATCG CAACGATCGG CGGCGCCACG
CATCCATTCG GTGAATGGCA TCTGCGCGGG CAGATGGGTG GCATATGGGC GCATCCGCTG
CGGGTGCTGG ATGGATGGAC GCTGACACTG GAAGCGTATG GCGCGACCAC GCCACTCGGT
CACGCAACGC AGTGCGACCT CTTTGGCGCA TACATCATCC GTCATTTTAC GGTGGGCGAC
CTGGCGCTGG AATGGACTGA GTTCGCCGCC GAGGATCAAC CGCACTACTA TGCTACGCTG
CTGACGCGCA ATGATGGCGC CGCTCCGGTA GAAGCCGTTG TCGTGCTGCG CGCCGAAGCC
GATCTGCGTT TCTGCTGGTT TGGCGGCATT GCTCCCGCCG AACCAGACTT CCACATCCTG
CCAGACGGCG TAGCCTGGCG AGCGCCAGGC GCGTATGCAG GCATCACGGC GATCCTGAGC
AGCTCAACGC CAACAGAATG GAACGTCGCA GGCAGAACGG CGCAGGCACG CTTTCCGCTG
GCGCTCCAAC CGGGTGAGGC GCTCGCGCTG CAATGGCGGC TCGCCGTGCA ACATGATGAT
GCACCGCCGC CAGGGAATGT GTTGCGCGCT GCGGTCGATA CCCTGTCGGC GAAGATCGCG
CTGTATCGGT CAATCGCCGG AGAGATACGC CTGGAAACAC CGGATGGCGA CCTGGACCGC
TTCTGGCAGG TGGCACGACA GAATATGCGG ATGCTCATCG CCGATTACCG TCCGGCGCTG
GCGCCCTACC TGCTGGCGGG ATTACCGGAA TACCCGCAAC TCTTCGGCTG CGATACAGCG
TACAGTGTGC CGGGCGTCGT CGCCGGAGGA TTCGCCGACA TCGCCCGCAG CGCGCTCGAG
GAACTCGGCA GGTATGCCTG GCGCGCGTGC AGTCGCGTGC CCCACGAAAT CACAACCAAT
GGGCGCGTCT ACCATCCGGG CAATATCCAG GAAACTCCGC AGTTCACCGT CGCCTGCTGG
GATTATGTGC GCTGGAGTGG CGACCTGGCG TTCCTGGAGC GGATATATCC GGTGTGCGTC
GAAGGATTGG AGCACTTTGG AACAACACTT GAAGGGCGCG GCTACCCGAT CGGCGATGGC
GTGGTCGAGG TTCCTGGGAT GGGCGCCTGT AAACTCGATA CGGTCTGTTA CCTCTATCAG
GCGCTGACAT CACTGCGCGA GATGGCGCTG GCACTGGGGC GACCGCACGA CGCCATCCGA
TTCGCTGGGT ATGCTGGTGC GCTGGCGGCG CGCTTCGAGC GCGATTGGTG GATCGAGCAG
GAAGGAATGT ATGCCGACTC GTTGCACCTC GACGAGCGGC AGCAGTTTGA TGGTCACTGG
ACGGTGATGC TGCCGGTCGT GACCGGCATC GCCACCCCAG AGCGGGCGCA ACGGACGCTG
GATCGGATCA TGCGCGAGTG GGTCAGCGAA TGGGGAATGC TGCACACCCG CGGCGCAGAC
TCACGGGTAT GGACGCTGCC GACCGGTCTG CTGGCGCTGG CGGCGTTCCG CACCGGCAGG
GCAGACGATG GACTCAGGCT GCTGCGATGT ATCGGCGAAA CGGCGCGCCA CGGAACGCTC
GGAACATTGA AAGAGTTGAT TCCGCAGGGA TTGTGCTTCA TCCAACTCTG GTCGGCAGGG
CTGCTCGTGC AGGGCGTGAC CGAAGGAATC TTTGGTCTTC ATCCACAGGC GCACCGTCAT
GAACTGATGG TCGAACCACA CCTGCCGGCA ACGTGGCGCC ATACAACGCT CCACGGCCTG
CGCGTGGGCG AACACACGCT CGATCTGCAT ATCGCGCGGG AGGCGATCAC GATCCGTCAT
CTGAAAGGGA ACGCACCCTT GCTGGTGCGC TACCGCGTCG CGCCCGATCA ACCCTGGCGC
GACGCACGCC TGACTCCGGG CAGTCGGGCG CTGCTGGCGC ACGAGGATTG A
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| Protein sequence | MTLQRYFVDD HVWEAEVEPT TPVFLSGKRI YAIATIGGAT HPFGEWHLRG QMGGIWAHPL
RVLDGWTLTL EAYGATTPLG HATQCDLFGA YIIRHFTVGD LALEWTEFAA EDQPHYYATL
LTRNDGAAPV EAVVVLRAEA DLRFCWFGGI APAEPDFHIL PDGVAWRAPG AYAGITAILS
SSTPTEWNVA GRTAQARFPL ALQPGEALAL QWRLAVQHDD APPPGNVLRA AVDTLSAKIA
LYRSIAGEIR LETPDGDLDR FWQVARQNMR MLIADYRPAL APYLLAGLPE YPQLFGCDTA
YSVPGVVAGG FADIARSALE ELGRYAWRAC SRVPHEITTN GRVYHPGNIQ ETPQFTVACW
DYVRWSGDLA FLERIYPVCV EGLEHFGTTL EGRGYPIGDG VVEVPGMGAC KLDTVCYLYQ
ALTSLREMAL ALGRPHDAIR FAGYAGALAA RFERDWWIEQ EGMYADSLHL DERQQFDGHW
TVMLPVVTGI ATPERAQRTL DRIMREWVSE WGMLHTRGAD SRVWTLPTGL LALAAFRTGR
ADDGLRLLRC IGETARHGTL GTLKELIPQG LCFIQLWSAG LLVQGVTEGI FGLHPQAHRH
ELMVEPHLPA TWRHTTLHGL RVGEHTLDLH IAREAITIRH LKGNAPLLVR YRVAPDQPWR
DARLTPGSRA LLAHED
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