| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1705 |
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| Symbol | |
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| ID | 8252807 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 2019598 |
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| End bp | 2021718 |
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| Gene Length | 2121 bp |
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| Protein Length | 706 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644935357 |
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| Product | hypothetical protein |
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| Protein accession | YP_003091978 |
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| Protein GI | 255531606 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3408] Glycogen debranching enzyme |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.410139 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00605437 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTGGAT TTGCTGTAAA AAATCTTCAA ATTGCAGTAG CCAATTTGAA CCCAAACCGC
ATGAATAAAT TTTTTACAAG AACGAAACTC ATTATGATTG GTTTTTGCAT GTCTACATTT
TCTGTATATG CACAAAAAAC CGTTTTGCCA AAGCAAACAG ATCGCTGGGC CATACAACCC
AATGGCAGCA TAACCTGGGC CATTAACAAC ACTGTACCAC ATACTGATCA CATAGAGATG
GCTGGTGAGA AGGTAGCCAT CTGGGTGGAA TATGGATTGG ATAGTATTAA AAGATCAAAA
ATCAGCCGTA CAGTTGTTTT TCCAACTTTC AGGATGTTGC CTGACGGAAC CAGAACGCAT
ATCTCCTATT CCTTTCAGGA TAATGAACTG CCTAGGTTTT ATGTAAATAA ACGCCTGCTT
GATTTTGGTA CAGCCAAAAG TAGTAAGTCT GGCAGCTTAG GCTATAGCAT TAAAAAGATC
AATCATAAAG GTATTATGCG TGTAAGCGCA GAAACCGGCA GCCCGGTATT GGCCACCATA
GAAAGGAGCT TTTTCCCCTC TGTTGACCAA CCTATGGCAA TAGAAAGGTT TGTGTTTACC
AATGTTACAG CCACTGATCT TCCCATAGCT ATGGAATACC TGAAACGTGA AGTGAAAACA
GATCCCTCCA GAAGCAAAGT GCAGGAACAT AGTGTAATTA TGGGTACGGT AGGTGATGGA
AACACTGTAG TTAAACCTGG TCAATCAGTC AGTTTTACGG TTTATTATCT GGCAACAGAC
CATCCTGACC AATTGCCTGT AATTAATGCA GATGCGGAAG AGCAAAAAAG AGTGGCAAGG
ATTAATGAAA TACAGGCTCC GTTAAAATTA GAAACGCCTG ATCAGGTATT GAACACCGCA
TTTGAATTTG CTAAACTTAG GGCAACTGAA AGTATTTATA AAACCAAGGG CGGTTATATG
CATGGTCCTG GTGGCCTGGC CTATTATGCA GCCATATGGG CAAATGACCA GGCTGAATAC
ATTAATCCCT ACTTTGCTTT TTCTGGCGAC AGGATTGGCC ACCTTTCGGC CATGAATGCT
TATGCCTGGT TTGCAAAATA CATGAACCCT GACTATAAAG CCATTCCAAG TTCTATCGTT
GCCGAAGGTG ACGCAGTTTG GAAAGGTGCT GGCGACAGGG GCGACCAGGC CATGATTGCC
TATGGGGCTT CGCGCTATGC GCTGGCCACC GGAAATATTG ATTCAGCCCG GAAATTATGG
CCTTTAATTG AGTGGTGCCT GGAATACAGC AAACGTAAAA TGAACGTTGA GGGAGTGGTT
ACTTCAGACA GAGATGAACT GGAAGGACGT TTTCCGGCAG GAAAGGCCAA CCTTTCTACC
AATACCCTAT ACTATGATGC CCTGCGCTCG GCAGTATTGC TTGGACAGGC ATTAAATAAA
CCAAAAAGCC AGACTGAAGC TTACCGCAAG GAGGCTGATG CGCTAAGGAT AAATATGGAA
AAATACTTTG GCGGCAATGT GGAAGGTTTT GAAACCTATA AATACTATGA AGGGAATGAT
GTGCTTAGGG CCTGGATTTG TCTGCCTTTA ACAATGGGGA TATTTGATAG GAAACAAGGA
ACTGTTGATG CCTTGTTTTC ACCAAGATTA TGGACTGCCG ACGGACTTGC CACACAGGCA
GGTAAAGAAA CTTTCTGGGA CAGATCAACT CTTTATGCTT TAAGAGGTGT ATTGCAGGCC
GGGGAGACGG AAAAAGCAAT GGATTTTATC AAATATTATT CACGGCGCAG GTTGCTCGGG
GATCATGTCC CTTATCCTGT GGAAGCTTAT CCGGAAGGTA ATCAAAGGCA TCTTTCTGCC
GAAAGTGGTT TATATTGCCG CATATTTACA GAAGGGTTGT TTGGCATGCG CCCCATAGGG
TTCCGCAGTT TTGAATGTAC GCCAAGAATG CCTGCAGAAT GGAACAATAT GGCCTTGCGC
AATATCCATT CTTTTGGAAA TGTATTTGAC CTGGAAGTAG CCCGGACGGC TAAAGGCAAA
TTGATGATCA CCATTAAAAA AGATGGCAAA GACTATAAAT ACCAAGTAAA AGAAGGTGCT
ATGCAAGTAA TTAAACTATA A
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| Protein sequence | MAGFAVKNLQ IAVANLNPNR MNKFFTRTKL IMIGFCMSTF SVYAQKTVLP KQTDRWAIQP
NGSITWAINN TVPHTDHIEM AGEKVAIWVE YGLDSIKRSK ISRTVVFPTF RMLPDGTRTH
ISYSFQDNEL PRFYVNKRLL DFGTAKSSKS GSLGYSIKKI NHKGIMRVSA ETGSPVLATI
ERSFFPSVDQ PMAIERFVFT NVTATDLPIA MEYLKREVKT DPSRSKVQEH SVIMGTVGDG
NTVVKPGQSV SFTVYYLATD HPDQLPVINA DAEEQKRVAR INEIQAPLKL ETPDQVLNTA
FEFAKLRATE SIYKTKGGYM HGPGGLAYYA AIWANDQAEY INPYFAFSGD RIGHLSAMNA
YAWFAKYMNP DYKAIPSSIV AEGDAVWKGA GDRGDQAMIA YGASRYALAT GNIDSARKLW
PLIEWCLEYS KRKMNVEGVV TSDRDELEGR FPAGKANLST NTLYYDALRS AVLLGQALNK
PKSQTEAYRK EADALRINME KYFGGNVEGF ETYKYYEGND VLRAWICLPL TMGIFDRKQG
TVDALFSPRL WTADGLATQA GKETFWDRST LYALRGVLQA GETEKAMDFI KYYSRRRLLG
DHVPYPVEAY PEGNQRHLSA ESGLYCRIFT EGLFGMRPIG FRSFECTPRM PAEWNNMALR
NIHSFGNVFD LEVARTAKGK LMITIKKDGK DYKYQVKEGA MQVIKL
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