10 homologs were found in PanDaTox collection
for query gene Ssed_0277 on replicon NC_009831
Organism: Shewanella sediminis HAW-EB3



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009831  Ssed_0277  TetR family transcriptional regulator  100 
 
 		 214 aa  451  1.0000000000000001e-126  Shewanella sediminis HAW-EB3  Bacteria  hitchhiker  0.000814335  hitchhiker  0.00000000327176 
 
 
-
 
NC_009052  Sbal_0259  TetR family transcriptional regulator  67.61 
 
 		 217 aa  306  2.0000000000000002e-82  Shewanella baltica OS155  Bacteria  normal  0.0135737  n/a   
 
 
-
 
NC_009997  Sbal195_0259  TetR family transcriptional regulator  65.44 
 
 		 217 aa  297  9e-80  Shewanella baltica OS195  Bacteria  normal  0.381942  normal  1 
 
 
-
 
NC_010506  Swoo_0279  TetR family transcriptional regulator  66.83 
 
 		 222 aa  292  3e-78  Shewanella woodyi ATCC 51908  Bacteria  normal  0.350213  unclonable  0.0000000198081 
 
 
-
 
NC_008322  Shewmr7_2225  TetR family transcriptional regulator  62.91 
 
 		 235 aa  289  2e-77  Shewanella sp. MR-7  Bacteria  normal  0.236275  normal  0.162404 
 
 
-
 
NC_008345  Sfri_3891  putative transcriptional regulator, TetR family protein  63.33 
 
 		 217 aa  287  9e-77  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_008321  Shewmr4_2148  TetR family transcriptional regulator  62.91 
 
 		 235 aa  286  2e-76  Shewanella sp. MR-4  Bacteria  normal  0.398076  normal  0.369487 
 
 
-
 
NC_009438  Sputcn32_3531  TetR family transcriptional regulator  59.81 
 
 		 235 aa  278  6e-74  Shewanella putrefaciens CN-32  Bacteria  normal  1  n/a   
 
 
-
 
NC_009901  Spea_3935  regulatory protein TetR  62.33 
 
 		 215 aa  273  1.0000000000000001e-72  Shewanella pealeana ATCC 700345  Bacteria  normal  0.0867734  n/a   
 
 
-
 
NC_013947  Snas_0257  transcriptional regulator, TetR family  31.33 
 
 		 188 aa  43.5  0.002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>