10 homologs were found in PanDaTox collection
for query gene Spea_3935 on replicon NC_009901
Organism: Shewanella pealeana ATCC 700345



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009901  Spea_3935  regulatory protein TetR  100 
 
 		 215 aa  446  1.0000000000000001e-124  Shewanella pealeana ATCC 700345  Bacteria  normal  0.0867734  n/a   
 
 
-
 
NC_009831  Ssed_0277  TetR family transcriptional regulator  62.33 
 
 		 214 aa  273  1.0000000000000001e-72  Shewanella sediminis HAW-EB3  Bacteria  hitchhiker  0.000814335  hitchhiker  0.00000000327176 
 
 
-
 
NC_009052  Sbal_0259  TetR family transcriptional regulator  60.28 
 
 		 217 aa  254  9e-67  Shewanella baltica OS155  Bacteria  normal  0.0135737  n/a   
 
 
-
 
NC_008322  Shewmr7_2225  TetR family transcriptional regulator  58.49 
 
 		 235 aa  252  4.0000000000000004e-66  Shewanella sp. MR-7  Bacteria  normal  0.236275  normal  0.162404 
 
 
-
 
NC_008321  Shewmr4_2148  TetR family transcriptional regulator  58.02 
 
 		 235 aa  251  7e-66  Shewanella sp. MR-4  Bacteria  normal  0.398076  normal  0.369487 
 
 
-
 
NC_009438  Sputcn32_3531  TetR family transcriptional regulator  56.07 
 
 		 235 aa  246  2e-64  Shewanella putrefaciens CN-32  Bacteria  normal  1  n/a   
 
 
-
 
NC_009997  Sbal195_0259  TetR family transcriptional regulator  56.13 
 
 		 217 aa  244  4.9999999999999997e-64  Shewanella baltica OS195  Bacteria  normal  0.381942  normal  1 
 
 
-
 
NC_010506  Swoo_0279  TetR family transcriptional regulator  57.28 
 
 		 222 aa  240  1e-62  Shewanella woodyi ATCC 51908  Bacteria  normal  0.350213  unclonable  0.0000000198081 
 
 
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NC_008345  Sfri_3891  putative transcriptional regulator, TetR family protein  52.91 
 
 		 217 aa  231  5e-60  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
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NC_013889  TK90_0855  transcriptional regulator, TetR family  34.92 
 
 		 244 aa  41.6  0.008  Thioalkalivibrio sp. K90mix  Bacteria  normal  1  normal  1 
 
 
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