9 homologs were found in PanDaTox collection
for query gene Sfri_3891 on replicon NC_008345
Organism: Shewanella frigidimarina NCIMB 400



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008345  Sfri_3891  putative transcriptional regulator, TetR family protein  100 
 
 		 217 aa  457  9.999999999999999e-129  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_009831  Ssed_0277  TetR family transcriptional regulator  63.33 
 
 		 214 aa  287  9e-77  Shewanella sediminis HAW-EB3  Bacteria  hitchhiker  0.000814335  hitchhiker  0.00000000327176 
 
 
-
 
NC_009052  Sbal_0259  TetR family transcriptional regulator  59.26 
 
 		 217 aa  283  2.0000000000000002e-75  Shewanella baltica OS155  Bacteria  normal  0.0135737  n/a   
 
 
-
 
NC_008322  Shewmr7_2225  TetR family transcriptional regulator  59.22 
 
 		 235 aa  272  3e-72  Shewanella sp. MR-7  Bacteria  normal  0.236275  normal  0.162404 
 
 
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NC_009997  Sbal195_0259  TetR family transcriptional regulator  60 
 
 		 217 aa  272  3e-72  Shewanella baltica OS195  Bacteria  normal  0.381942  normal  1 
 
 
-
 
NC_008321  Shewmr4_2148  TetR family transcriptional regulator  59.22 
 
 		 235 aa  271  5.000000000000001e-72  Shewanella sp. MR-4  Bacteria  normal  0.398076  normal  0.369487 
 
 
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NC_009438  Sputcn32_3531  TetR family transcriptional regulator  58.25 
 
 		 235 aa  270  1e-71  Shewanella putrefaciens CN-32  Bacteria  normal  1  n/a   
 
 
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NC_010506  Swoo_0279  TetR family transcriptional regulator  57.55 
 
 		 222 aa  267  8.999999999999999e-71  Shewanella woodyi ATCC 51908  Bacteria  normal  0.350213  unclonable  0.0000000198081 
 
 
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NC_009901  Spea_3935  regulatory protein TetR  52.91 
 
 		 215 aa  231  5e-60  Shewanella pealeana ATCC 700345  Bacteria  normal  0.0867734  n/a   
 
 
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