6 homologs were found in PanDaTox collection
for query gene Sros_R0073 on replicon NC_013595
Organism: Streptosporangium roseum DSM 43021



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013595  Sros_R0073  tRNA-Leu  100 
 
 
73 bp  145  2e-33  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_008578  Acel_R0053  tRNA-Leu  88.73 
 
 
73 bp  77.8  0.0000000000003  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_R0051  tRNA-Leu  88.73 
 
 
76 bp  77.8  0.0000000000003  Thermobispora bispora DSM 43833  Bacteria  normal  hitchhiker  0.000393189 
 
 
-
 
NC_013235  Namu_R0050  tRNA-Leu  88.89 
 
 
77 bp  71.9  0.00000000002  Nakamurella multipartita DSM 44233  Bacteria  normal  0.858981  normal  0.692248 
 
 
-
 
NC_013757  Gobs_R0018  tRNA-Leu  92.68 
 
 
77 bp  50.1  0.00007  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.44419  n/a   
 
 
-
 
NC_013093  Amir_R0030  tRNA-Leu  100 
 
 
76 bp  44.1  0.004  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
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