10 homologs were found in PanDaTox collection
for query gene Snas_3556 on replicon NC_013947
Organism: Stackebrandtia nassauensis DSM 44728



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013947  Snas_3556  hypothetical protein  100 
 
 
353 aa  710    Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_3240  hypothetical protein  41.07 
 
 
354 aa  202  5e-51  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.0144295 
 
 
-
 
NC_013947  Snas_2809  hypothetical protein  27.53 
 
 
304 aa  70.1  0.00000000006  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.830313  normal 
 
 
-
 
NC_013947  Snas_4027  hypothetical protein  26.72 
 
 
387 aa  65.1  0.000000002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.354073  normal 
 
 
-
 
NC_002977  MCA2974  PKD domain-containing protein  33.04 
 
 
833 aa  51.2  0.00003  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1424  extracellular repeat protein, HAF family  38.96 
 
 
386 aa  49.7  0.00008  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.0000000000000371296 
 
 
-
 
NC_014151  Cfla_0067  extracellular repeat protein, HAF family  30.32 
 
 
391 aa  45.1  0.002  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.899594  normal  0.0302964 
 
 
-
 
NC_007777  Francci3_4152  hypothetical protein  28.45 
 
 
363 aa  43.1  0.008  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_009675  Anae109_1986  extracellular HAF  42.5 
 
 
489 aa  42.7  0.009  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.0338613  normal 
 
 
-
 
NC_013947  Snas_2858  hypothetical protein  32.06 
 
 
391 aa  42.7  0.01  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.174477  normal 
 
 
-
 
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