Gene Snas_3240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3240 
Symbol 
ID8884439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3419340 
End bp3420404 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content66% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003512003 
Protein GI291300725 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0144295 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCAC GTCCCAAGCT GCTGCTGGCG CTGGCCGGTG GCGTGGCGGC CGCGGCGATC 
GCCGTCCCGG TCGTGTCGGC CGTGGCCGAC GGTTCGCCCC CCGCCGGGAA CTCCGCCTCG
AACTCCACAG CGGACTGCGA ACTGACCGAA CTCGCCTTCC CGGACGGATA CGACAAGGAC
GTCAAGGCAC GGTCCGTGTC GGCTTCAGGC GAATACGCCG CTGGCGGCGC TCTCGGCGAA
GACGGGGACA ATCCGGTGCT GTGGCATGAC GGCAAGGCGA TCGTGCCCGA GGAACTGAAG
TCCGACACCA CCGGTGCGTC GGCCGTCAAC GACTCCGGGC AGATGGTCGG CAGCCGCGGC
GCCGGGGAGG CCACCGTGCC GTGGCTGTAC CAGGACGGCA AGGTCACCAA CCTCAAAGTC
CCCAAGGGAC AATCGGGCAA CTCCCGGGAC ATCAACAACG CCGGTCAAGT CGTCGGATAC
ACCCAAGACG ATGAGGGCAG GACCTTCCCG GCGCTGTGGC CGTCACCGGA TGCCGAGCCC
GTGTTGCTGG ACAACCCGTT CGAGGACGGC GGCGGCAGGG CGTACTCGAT CAACGAGGAG
GGCACGATCT CCGGAAAGTT GATCGATCCC CAGGACATGA CCGTCCACTT GTGGAAGTGG
ACCGCCGACG GCAAGGGCGA GGAACTGAAG CGCCCGGACC CCGGCGACAT GGTCGACCAG
GACGTCAAGA CCAGCATCAG CGGTGACCAC GTGGTCTCGG TGAACATCGC CCCGATCGGC
GCGTTTCCGG CGTACGCGTG GAACCTGTCG GAAGGCACCG ACGGCACTGA GATCGGGCTG
CCGGTCGTGG AAGCGGTCAG TGCCGACGGC ACGATAGTCG GACTGTCCAA GGACGACAAA
CCGGCGATGC TCATCGACGG CGCGGTCACC GAACTGCCGG GAGTCCAAGG CCCCGCCTCG
AACACCGACG TCGCCCATGA CATCAACCAG AAGGGCGACG TCATCGTCGG CGGGGTCGTC
GACGAGAACG ACAAACAACA CCCCGCGATG TGGAACTGCG GTTAA
 
Protein sequence
MNARPKLLLA LAGGVAAAAI AVPVVSAVAD GSPPAGNSAS NSTADCELTE LAFPDGYDKD 
VKARSVSASG EYAAGGALGE DGDNPVLWHD GKAIVPEELK SDTTGASAVN DSGQMVGSRG
AGEATVPWLY QDGKVTNLKV PKGQSGNSRD INNAGQVVGY TQDDEGRTFP ALWPSPDAEP
VLLDNPFEDG GGRAYSINEE GTISGKLIDP QDMTVHLWKW TADGKGEELK RPDPGDMVDQ
DVKTSISGDH VVSVNIAPIG AFPAYAWNLS EGTDGTEIGL PVVEAVSADG TIVGLSKDDK
PAMLIDGAVT ELPGVQGPAS NTDVAHDINQ KGDVIVGGVV DENDKQHPAM WNCG