Gene Snas_3556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3556 
Symbol 
ID8884755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3768114 
End bp3769175 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content65% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003512311 
Protein GI291301033 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCAC GTCGCAAACT GACGCTGCTC GCACTGGCGG CCGGCTCGGT GGCGCTGGCG 
GTTCCCACGA CGTCGGTGCT CGCCGACGCC GAGGACACGT CACCGGATAG CGGCTGCGAG
GTCGAGACGC TGCCGACCCC CGAGGGATAC AAGGCGGTGG TCGCCACCGA CGTATCCGGT
TCCGGAGACC ACATCGTCGG GATGACTCGG CGCGGCGACG ACGGCAGGGC CGTCCCGGTG
ATCTGGCGTG ACGGCAAGGT ACAGACGATC GACGAACTGG ACACCCACGA CACCTGGCCG
AAAGGAGTGA ACGACGCCGG TCAGGTGATC GGCAACCACG ACTCCAGTTA CGGCACCGTA
CCCTGGGTCT ACCACGACGG CAAGATCACC GACCTCAAAG TCGGGAAGGG ACAATCGGCG
TTCGCCTACG ACATCAACAA CTCCGGGCAG ATCGTCGGAT TCATCTTCGA AGAGGACGGC
GACGCGCCGA AGCGCGCGGT GCTGTGGAAG TCCGTCGACT CTGACCCGGT CACGCTGCCC
GTCTTCGACG AGAAGGCGGA GGCGCGGGGA ACCGGCATCG ACGAGGACGG CACGGTCACC
GGAATCCAGG CCGCCCCGGA TGACAAGACC ACCCGAATCT GGGCATGGGA TCCCAACGGC
GGCAAGGGCA GGGAACTCAC CCGCCCCGTC ATCGACAACC CCGAAGAACA TCCCATGACC
ACCGAAGTCC GGGGCGGTCA CGTCATCTCA CTGGACGACA GAGGCGTGCC GGGATACCAG
TGGGACCTGT CCGATCTCAA GGAAGGCACC GAGATCGACA TAGCGCATCC GATGAACGTC
AACCCGGACG GCACCATCGT CGGGATCACC AAGGACAACA ATGCGGCCAT GCTGACGTCC
CAGGGCGTCA CCGAACTGCC GAACGCATCG GCACCCTCCA ATGAGACCGG TGACAATGTC
GCCGCGGCGA TCAGCGACTC CGGTGACATC GCCGTCGGCA ACGGCGTCTC CAGAAATGGA
GACAAGGAGC TGTACATCGC CGCCAAGTGG ACCTGCGGCT AG
 
Protein sequence
MKARRKLTLL ALAAGSVALA VPTTSVLADA EDTSPDSGCE VETLPTPEGY KAVVATDVSG 
SGDHIVGMTR RGDDGRAVPV IWRDGKVQTI DELDTHDTWP KGVNDAGQVI GNHDSSYGTV
PWVYHDGKIT DLKVGKGQSA FAYDINNSGQ IVGFIFEEDG DAPKRAVLWK SVDSDPVTLP
VFDEKAEARG TGIDEDGTVT GIQAAPDDKT TRIWAWDPNG GKGRELTRPV IDNPEEHPMT
TEVRGGHVIS LDDRGVPGYQ WDLSDLKEGT EIDIAHPMNV NPDGTIVGIT KDNNAAMLTS
QGVTELPNAS APSNETGDNV AAAISDSGDI AVGNGVSRNG DKELYIAAKW TCG