7 homologs were found in PanDaTox collection
for query gene Smed_6441 on replicon NC_009622
Organism: Sinorhizobium medicae WSM419



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009622  Smed_6441    100 
 
 
168 bp  333  9e-90  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_009622  Smed_6426    89.33 
 
 
202 bp  151  7e-35  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_009467  Acry_3244  phage integrase domain/SAM domain-containing protein  87.06 
 
 
237 bp  81.8  0.00000000000005  Acidiphilium cryptum JF-5  Bacteria  normal  0.042229  n/a   
 
 
-
 
NC_007964  Nham_2797  phage integrase-like SAM-like  91.53 
 
 
225 bp  77.8  0.0000000000008  Nitrobacter hamburgensis X14  Bacteria  normal  0.554398  n/a   
 
 
-
 
NC_007964  Nham_0858  phage integrase  89.36 
 
 
870 bp  54  0.00001  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_6037    92.31 
 
 
486 bp  54  0.00001  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.197472  normal 
 
 
-
 
NC_011894  Mnod_0884    91.43 
 
 
842 bp  46.1  0.003  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.552937  n/a   
 
 
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