7 homologs were found in PanDaTox collection
for query gene BBta_6037 on replicon NC_009485
Organism: Bradyrhizobium sp. BTAi1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009485  BBta_6037    100 
 
 
486 bp  963    Bradyrhizobium sp. BTAi1  Bacteria  normal  0.197472  normal 
 
 
-
 
NC_009485  BBta_3124  putative integrase/recombinase  90.49 
 
 
558 bp  422  1e-116  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.505394  normal 
 
 
-
 
NC_007964  Nham_0858  phage integrase  78.82 
 
 
870 bp  113  5e-23  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_009622  Smed_6441    92.31 
 
 
168 bp  54  0.00004  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_008687  Pden_3393    90.24 
 
 
892 bp  50.1  0.0006  Paracoccus denitrificans PD1222  Bacteria  normal  0.281539  normal 
 
 
-
 
NC_009485  BBta_6038    100 
 
 
222 bp  50.1  0.0006  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.237291  normal 
 
 
-
 
NC_009656  PSPA7_5152  HK97 family phage portal protein  96.3 
 
 
1239 bp  46.1  0.009  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
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