Gene BBta_3124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3124 
Symbol 
ID5149046 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3275505 
End bp3276062 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content66% 
IMG OID640557991 
Productputative integrase/recombinase 
Protein accessionYP_001239145 
Protein GI148254560 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.505394 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGCGGG TCAAGGACTT CGCCTTCATC GGACGGTCGC CGGATCTGGC GAGCTTCGAG 
GACGTGCGGC GCTATCAGCT TCATCTGGCA TCGCGCGGCG CCGGCGTGCC GACCATCAAC
CAGACGGTCT CGACCTTGCG GTTCTTCTGC AAGATCACGC TGCGGCGTCA CGAGATCGTC
GAGCACACCC ACGTCATCCA CGAGCCGCGC AAGCTGCCGG TGGTGCTGAG CGTGGAGGAC
GTGGCGCGGC TGCTCGATGC GGCACCCGGG CTCAAATACA AGGCGGCGCT CAGCGTCGAC
TATGGCGCCG GCCTGCGAGC CAACGAGGTC GTCTCGCGCA AGATCTCGCA CCCCGCTGAA
CCGCTCAATC TGTCGAACCG CCGTATACGT ACGTACGGTT GTGTGGGAGG GGCGGAGTCG
CGAGACTTCC CCTATCCCGA TAGGCCGTCA CCCGGCGTTC CCTGCGCCAT CTCGATGCCG
AGCGGGCCGT CGACCGCAAG CTTCGGTCGC CGTCCGCCGC GAGATCGCGC GCGTGTGTGC
TGTTTGAAAC GTGGATAG
 
Protein sequence
MQRVKDFAFI GRSPDLASFE DVRRYQLHLA SRGAGVPTIN QTVSTLRFFC KITLRRHEIV 
EHTHVIHEPR KLPVVLSVED VARLLDAAPG LKYKAALSVD YGAGLRANEV VSRKISHPAE
PLNLSNRRIR TYGCVGGAES RDFPYPDRPS PGVPCAISMP SGPSTASFGR RPPRDRARVC
CLKRG