Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_3124 |
Symbol | |
ID | 5149046 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 3275505 |
End bp | 3276062 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640557991 |
Product | putative integrase/recombinase |
Protein accession | YP_001239145 |
Protein GI | 148254560 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.505394 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCAGCGGG TCAAGGACTT CGCCTTCATC GGACGGTCGC CGGATCTGGC GAGCTTCGAG GACGTGCGGC GCTATCAGCT TCATCTGGCA TCGCGCGGCG CCGGCGTGCC GACCATCAAC CAGACGGTCT CGACCTTGCG GTTCTTCTGC AAGATCACGC TGCGGCGTCA CGAGATCGTC GAGCACACCC ACGTCATCCA CGAGCCGCGC AAGCTGCCGG TGGTGCTGAG CGTGGAGGAC GTGGCGCGGC TGCTCGATGC GGCACCCGGG CTCAAATACA AGGCGGCGCT CAGCGTCGAC TATGGCGCCG GCCTGCGAGC CAACGAGGTC GTCTCGCGCA AGATCTCGCA CCCCGCTGAA CCGCTCAATC TGTCGAACCG CCGTATACGT ACGTACGGTT GTGTGGGAGG GGCGGAGTCG CGAGACTTCC CCTATCCCGA TAGGCCGTCA CCCGGCGTTC CCTGCGCCAT CTCGATGCCG AGCGGGCCGT CGACCGCAAG CTTCGGTCGC CGTCCGCCGC GAGATCGCGC GCGTGTGTGC TGTTTGAAAC GTGGATAG
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Protein sequence | MQRVKDFAFI GRSPDLASFE DVRRYQLHLA SRGAGVPTIN QTVSTLRFFC KITLRRHEIV EHTHVIHEPR KLPVVLSVED VARLLDAAPG LKYKAALSVD YGAGLRANEV VSRKISHPAE PLNLSNRRIR TYGCVGGAES RDFPYPDRPS PGVPCAISMP SGPSTASFGR RPPRDRARVC CLKRG
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