7 homologs were found in PanDaTox collection
for query gene Smed_4429 on replicon NC_009620
Organism: Sinorhizobium medicae WSM419



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009620  Smed_4429  hypothetical protein  100 
 
 
135 aa  278  2e-74  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.978681 
 
 
-
 
NC_009667  Oant_1850  periplasmic protein-like protein  65.55 
 
 
351 aa  162  1.0000000000000001e-39  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B5200  hypothetical protein  43.33 
 
 
306 aa  70.1  0.00000000001  Ralstonia eutropha JMP134  Bacteria  normal  0.782608  n/a   
 
 
-
 
NC_010625  Bphy_6360  lipoprotein  41.11 
 
 
296 aa  70.1  0.00000000001  Burkholderia phymatum STM815  Bacteria  normal  normal  0.419648 
 
 
-
 
NC_007974  Rmet_5126  hypothetical protein  44.05 
 
 
307 aa  68.9  0.00000000002  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_1411  periplasmic protein-like protein  37.23 
 
 
302 aa  48.1  0.00004  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.202803  normal  0.391906 
 
 
-
 
NC_012850  Rleg_1514  periplasmic protein-like protein  32 
 
 
302 aa  44.3  0.0006  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0326247  normal 
 
 
-
 
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