12 homologs were found in PanDaTox collection
for query gene Smed_2727 on replicon NC_009636
Organism: Sinorhizobium medicae WSM419



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009636  Smed_2727  putative cytochrome c protein  100 
 
 		 113 aa  223  5.0000000000000005e-58  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011757  Mchl_4217  hypothetical protein  60.67 
 
 		 120 aa  106  9.000000000000001e-23  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0188082  normal  1 
 
 
-
 
NC_007948  Bpro_3017  sulfite dehydrogenase (cytochrome) subunit SorB  59.74 
 
 		 107 aa  99.4  2e-20  Polaromonas sp. JS666  Bacteria  normal  1  normal  0.526573 
 
 
-
 
NC_008782  Ajs_0034  sulfite dehydrogenase (cytochrome) subunit SorB  57.14 
 
 		 109 aa  86.3  1e-16  Acidovorax sp. JS42  Bacteria  normal  0.551832  normal  0.0979537 
 
 
-
 
NC_010002  Daci_0054  cytochrome c, class I  53.66 
 
 		 115 aa  85.9  2e-16  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013739  Cwoe_4247  hypothetical protein  45.68 
 
 		 165 aa  59.3  0.00000002  Conexibacter woesei DSM 14684  Bacteria  normal  0.803221  normal  0.4086 
 
 
-
 
NC_013739  Cwoe_1286  cytochrome c class I  70.59 
 
 		 701 aa  50.4  0.000008  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  0.277764 
 
 
-
 
NC_009485  BBta_0697  putative cytochrome C  27.38 
 
 		 97 aa  43.5  0.001  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013739  Cwoe_1510  cytochrome c class I  51.11 
 
 		 174 aa  42.4  0.002  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  0.161195 
 
 
-
 
NC_013739  Cwoe_1903  cytochrome c oxidase, subunit II  31.87 
 
 		 344 aa  42.4  0.002  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008025  Dgeo_0317  cytochrome c, class I  38.55 
 
 		 285 aa  42  0.003  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  decreased coverage  0.00320646 
 
 
-
 
NC_013422  Hneap_1907  cytochrome c, class I  29.55 
 
 		 126 aa  40.4  0.008  Halothiobacillus neapolitanus c2  Bacteria  unclonable  0.00000266985  n/a   
 
 
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