10 homologs were found in PanDaTox collection
for query gene Smal_1306 on replicon NC_011071
Organism: Stenotrophomonas maltophilia R551-3



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011071  Smal_1306  hypothetical protein  100 
 
 
118 aa  212  9.999999999999999e-55  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.202527 
 
 
-
 
NC_009901  Spea_1502  hypothetical protein  41.27 
 
 
160 aa  56.2  0.0000001  Shewanella pealeana ATCC 700345  Bacteria  normal  0.387853  n/a   
 
 
-
 
NC_009092  Shew_2241  hypothetical protein  35 
 
 
146 aa  46.2  0.0001  Shewanella loihica PV-4  Bacteria  unclonable  0.00000000626898  hitchhiker  0.00075643 
 
 
-
 
NC_009831  Ssed_2858  hypothetical protein  35.11 
 
 
181 aa  46.2  0.0002  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.0000000291416 
 
 
-
 
NC_010501  PputW619_2853  hypothetical protein  36.07 
 
 
173 aa  45.4  0.0003  Pseudomonas putida W619  Bacteria  normal  0.652841  normal  0.16836 
 
 
-
 
NC_010322  PputGB1_2002  hypothetical protein  35.65 
 
 
146 aa  43.5  0.001  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_2636  hypothetical protein  33.9 
 
 
117 aa  42.7  0.002  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.82206  n/a   
 
 
-
 
NC_009656  PSPA7_1836  hypothetical protein  35.77 
 
 
104 aa  41.2  0.005  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_2007  hypothetical protein  50.82 
 
 
143 aa  40.8  0.007  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008463  PA14_21570  hypothetical protein  34.15 
 
 
104 aa  40.4  0.009  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>