11 homologs were found in PanDaTox collection
for query gene Slin_1877 on replicon NC_013730
Organism: Spirosoma linguale DSM 74



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013730  Slin_1877  Curlin associated repeat protein  100 
 
 
441 aa  837    Spirosoma linguale DSM 74  Bacteria  normal  0.246502  normal 
 
 
-
 
NC_013730  Slin_4726  Curlin associated repeat protein  30.13 
 
 
415 aa  97.8  3e-19  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_6066  Curlin associated repeat protein  28.92 
 
 
578 aa  89.4  1e-16  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_4724  hypothetical protein  30.5 
 
 
470 aa  85.9  0.000000000000001  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_4677  Curlin associated repeat protein  30.8 
 
 
392 aa  72.4  0.00000000001  Spirosoma linguale DSM 74  Bacteria  normal  0.119342  normal  0.286934 
 
 
-
 
NC_007511  Bcep18194_B2590  curlin associated protein  30.73 
 
 
457 aa  58.5  0.0000002  Burkholderia sp. 383  Bacteria  normal  0.0823306  normal 
 
 
-
 
NC_013730  Slin_6064  Curlin associated repeat protein  27.84 
 
 
453 aa  55.1  0.000002  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_3235  curlin-associated protein  29.84 
 
 
627 aa  50.1  0.00008  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_3364  Curlin associated repeat protein  31.53 
 
 
241 aa  46.6  0.0008  Spirosoma linguale DSM 74  Bacteria  normal  0.730228  normal  0.191795 
 
 
-
 
NC_008345  Sfri_1516  curlin-associated protein  28.04 
 
 
552 aa  44.7  0.003  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.977405  n/a   
 
 
-
 
NC_009441  Fjoh_2346  curlin-associated protein  30.07 
 
 
281 aa  43.9  0.006  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>