Gene Slin_1877 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1877 
Symbol 
ID8725614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2267066 
End bp2268391 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content47% 
IMG OID 
ProductCurlin associated repeat protein 
Protein accessionYP_003386721 
Protein GI284036791 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.246502 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAG CTGTATTATC CGGTATTGCA CTGATGTGGT TTGCCGCTGC CGCGTACGCT 
CAAACGAATA CCGCAAACCT CGACCAAAAT GGAATATCAC AGTCCGGTAC CATCAACCAA
ACGGGGCAGG AGCAGACCGC CACGATTCTC CAGAAAGGCA CGGGGAATTT AAACAACATC
GGGGTGATTC TGCAATCATC GAAGGTCGCT CAGACCGGTA TCATTAGCCA GATGGATGGT
GCCAAAAGCA ATAGTGCCAA TATAAATCAG ACTGACCTGA TTCCAACCTC AAGCAGCACG
GATCTCAACA CAGCCAGCAT TCAGCAGATT ACGGGCGCTA TCGGCGGTAG TGACTTAAAT
ATTGCTCAGA TTACACAGAG TGGCCGGGGG GCTGCGGCCA GTATTGAGCA GAAAAATTAC
TCGACTAGTA ACCAGGCCAG TATAGTCCAG GCGCTGGCCG GTGCCGGTAC AGCTACCATT
CATCAGAATG GTAGTGCGTC GCAGAATACA TTCTCAGTAG GGCAGCGAGC AACCATCAGC
CAGATGGGCG GAAACCACAC CGCTTCTATT GACCAAAGTG CTTACAGCGC AAACAACCAG
TCGTACATAA CCCAAACAGG TGGCGGTGCT ACAAATGGCA ACACGGCGAT TACCCAGCAG
AATAATACCT CGGGGCAAAA TATAATCACG ATGAATCAGT CGGGGTCTCT ACTAAACGCA
ACAGTCGAGC AGTCATTTGA AAGTTACAAC AACAATGTAA AGCTTACGCA GTCGGGTTCG
CAGAATAACG CGACTATTAC GGAGACGCTG GTATCGGATG GAAACTCAGT TGAATCGTCG
CAGTCCTTTG TTTTCAATAA TTTATACGTG GAGCAGAAAA ATAGTTCTAT CAATAACAAA
GTATATACGA ATCAGGGCGG ATTTATAGGT ACGATAACCG TTCGGCAAAA TGGAGCCAGC
GAAAGTGTGG CAACCGTTAA TCAGAACACA AACTTTATTG GGTTATTTAA CCTGACTGAT
CTAATGCAAA CGGGCCACAA CCAGGTAGTG ACAGTTTCTC AGGATAATAG TTCGAATACG
ATTCGTTTTA AGCAGGAAGA TGGTGGCGGA ACCAAGGGAG GGAACGTGGC CACACTGACT
CAGTTGGGTG ACACTAACGT AATTCAGGGT ATTGATGGTA CGGGTGGGTT TGGCCTGCAA
AGCGGAACGA CAAACACGTT GACTATCTCC CAGAATTCAT CCGGTACTAT TTTGTCAAAC
ATAGCCAATG TAAGTCAGGT TGGTACCGGC AACATTGGGT CGATCACCCA AGTAAGAGGT
AACTAA
 
Protein sequence
MKKAVLSGIA LMWFAAAAYA QTNTANLDQN GISQSGTINQ TGQEQTATIL QKGTGNLNNI 
GVILQSSKVA QTGIISQMDG AKSNSANINQ TDLIPTSSST DLNTASIQQI TGAIGGSDLN
IAQITQSGRG AAASIEQKNY STSNQASIVQ ALAGAGTATI HQNGSASQNT FSVGQRATIS
QMGGNHTASI DQSAYSANNQ SYITQTGGGA TNGNTAITQQ NNTSGQNIIT MNQSGSLLNA
TVEQSFESYN NNVKLTQSGS QNNATITETL VSDGNSVESS QSFVFNNLYV EQKNSSINNK
VYTNQGGFIG TITVRQNGAS ESVATVNQNT NFIGLFNLTD LMQTGHNQVV TVSQDNSSNT
IRFKQEDGGG TKGGNVATLT QLGDTNVIQG IDGTGGFGLQ SGTTNTLTIS QNSSGTILSN
IANVSQVGTG NIGSITQVRG N