Gene Slin_6066 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6066 
Symbol 
ID8729847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7363844 
End bp7365580 
Gene Length1737 bp 
Protein Length578 aa 
Translation table11 
GC content48% 
IMG OID 
ProductCurlin associated repeat protein 
Protein accessionYP_003390827 
Protein GI284040897 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA TTATCCTCAC CGGTACCGCT ATTGTAGCGC TTGCTGCAGC CTGCTTCGCA 
CAGAATAATA CATCGACGAT TAGCCAATCT GGCAACCAAC AGAGTGCAGG AGCTACTCAG
AAAGGAAAGG ACCTGATATC GACTATTGTA CAAACTTCGG CTGGCGGGAT TACCAACGTT
GGCAATTTTG CCAAAACTGT CCAGAAATCA TCTTCATTAC TCTCGGAGAA AAATCAAGCC
ATTATTAACC AGTTGGGTAC AGCCTATGGC TCTGCGACTA TTGAGCAGGA AGGTGTTGGT
AATCAATCAA CGATCAGCCA GAAAAATAAC AACGCCGAAT CGAGCGGAGA CGGCAATCTG
GTAACAACGT TCCAAAGGGG GTTCAATCAA GTGCTGACCG TTAACCAGAA TGATAATTCG
AAAGGCAATC TGGTTACGAT GCGCCAGGAG AATACAGGGA CTGCCCAAAC GGCAACGGTT
GACCAAAATA ACGTATCCAC CCGAAACTCG GCTACAACGA ACCAGTTTGG TAATAACAAT
ACCCTAAGCA TTAGTCAGTC GAATAATTCG AACAACAACA CCGCTAATGT TCGGCAGGGT
TTTGCTCCCA ACATGGGGGC CAGCGCGTTT AATGCAACGG CTCTCGTTGA ACAGAACGGC
GGAGCTTTGG GTAGTTCGTC GGGCAACGAG GCCACCATAA CGCAAATCAA CAGAGCGTCT
AACATTGCCA AAATTTTCCA GAACAACGGC AGTGGGGGCA TTGGCGAAGC AGGGAACGAT
GTCACCATCA ATCAATCAGG TGTCCTGGGG TCCATTGCCA GCGTAAGCCA GAGTAACAAC
TCCCAGAATA ACTCTACGGT TATCAACCAA TCCGTGGCTG GTCAGCATAC GGCTTACATA
TCGCAGGATG GCGATGGCAA CTTCAACAGT TTCAATAACA CGGTAGCGGT TAACCAAACC
GGGAGCGGCA ATAAAGCGGA TGTTCGTCAG TTGGGCATTG ATGCCAATAA AAATGGCCAG
GGAGGCAGTT ACAATAACGT GGCAAACGTT ACCCAGTCCA ATCAACTAAA TCAGGCATTT
ATCGTTCAGA AGGATTTGAG CGCCTTCAAC ACGGCAACCA TCAATCAGGC CGGGGTTAAT
GATATAGGGA CCATTACCCA GTCGATAAAC TCAATCGCTA ATAACGCAAC GATTAATCAG
GGCGCATTTA GCAGCGGCAA CAACAGAGCG ACGATCACGC AGCAGCAATC TGCGCCTGAG
GGTGGTTTGG GCGGAAACTC AGCTACCATT AATCAGAACT TACTGGCAGC GGGCAGTGCG
AATATTGCAA CCATTGTGCA GGGATTTCTA CCCTCAGTTA GTAACTCAAA TGCCAATCTG
GCAACCATCA GTCAGGAAGG CAGTTCGAAC CAGGCTCGTC TGCAACAAAC GGGGGATCTA
AACGTAGCGA CGATCATGCA GACCGGCAAC GGCAACATCG TTCGAAATGC GGATGCATCC
CTTAACTCCT CGGCTCTTCA GCAAGGGTCG AACAACAAAC TGACCGTAGA ACAGATAGCC
GGATCCAGTG GCAACATCGC GAACGTAGCG CAAATCGGTT CGGATAATAT TGCCAATATC
CTGCAAAATG GTTCAGCTAA TACCGTCAAC TTGTCGGAGA TCGGCAATGG TCAAAAAATC
TCCGTTTCAC AGTCGGGCAC TGGTAATACA GTAACCATCA GCCTTATTGG TAACTAG
 
Protein sequence
MKKIILTGTA IVALAAACFA QNNTSTISQS GNQQSAGATQ KGKDLISTIV QTSAGGITNV 
GNFAKTVQKS SSLLSEKNQA IINQLGTAYG SATIEQEGVG NQSTISQKNN NAESSGDGNL
VTTFQRGFNQ VLTVNQNDNS KGNLVTMRQE NTGTAQTATV DQNNVSTRNS ATTNQFGNNN
TLSISQSNNS NNNTANVRQG FAPNMGASAF NATALVEQNG GALGSSSGNE ATITQINRAS
NIAKIFQNNG SGGIGEAGND VTINQSGVLG SIASVSQSNN SQNNSTVINQ SVAGQHTAYI
SQDGDGNFNS FNNTVAVNQT GSGNKADVRQ LGIDANKNGQ GGSYNNVANV TQSNQLNQAF
IVQKDLSAFN TATINQAGVN DIGTITQSIN SIANNATINQ GAFSSGNNRA TITQQQSAPE
GGLGGNSATI NQNLLAAGSA NIATIVQGFL PSVSNSNANL ATISQEGSSN QARLQQTGDL
NVATIMQTGN GNIVRNADAS LNSSALQQGS NNKLTVEQIA GSSGNIANVA QIGSDNIANI
LQNGSANTVN LSEIGNGQKI SVSQSGTGNT VTISLIGN