Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_6066 |
Symbol | |
ID | 8729847 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 7363844 |
End bp | 7365580 |
Gene Length | 1737 bp |
Protein Length | 578 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | |
Product | Curlin associated repeat protein |
Protein accession | YP_003390827 |
Protein GI | 284040897 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAA TTATCCTCAC CGGTACCGCT ATTGTAGCGC TTGCTGCAGC CTGCTTCGCA CAGAATAATA CATCGACGAT TAGCCAATCT GGCAACCAAC AGAGTGCAGG AGCTACTCAG AAAGGAAAGG ACCTGATATC GACTATTGTA CAAACTTCGG CTGGCGGGAT TACCAACGTT GGCAATTTTG CCAAAACTGT CCAGAAATCA TCTTCATTAC TCTCGGAGAA AAATCAAGCC ATTATTAACC AGTTGGGTAC AGCCTATGGC TCTGCGACTA TTGAGCAGGA AGGTGTTGGT AATCAATCAA CGATCAGCCA GAAAAATAAC AACGCCGAAT CGAGCGGAGA CGGCAATCTG GTAACAACGT TCCAAAGGGG GTTCAATCAA GTGCTGACCG TTAACCAGAA TGATAATTCG AAAGGCAATC TGGTTACGAT GCGCCAGGAG AATACAGGGA CTGCCCAAAC GGCAACGGTT GACCAAAATA ACGTATCCAC CCGAAACTCG GCTACAACGA ACCAGTTTGG TAATAACAAT ACCCTAAGCA TTAGTCAGTC GAATAATTCG AACAACAACA CCGCTAATGT TCGGCAGGGT TTTGCTCCCA ACATGGGGGC CAGCGCGTTT AATGCAACGG CTCTCGTTGA ACAGAACGGC GGAGCTTTGG GTAGTTCGTC GGGCAACGAG GCCACCATAA CGCAAATCAA CAGAGCGTCT AACATTGCCA AAATTTTCCA GAACAACGGC AGTGGGGGCA TTGGCGAAGC AGGGAACGAT GTCACCATCA ATCAATCAGG TGTCCTGGGG TCCATTGCCA GCGTAAGCCA GAGTAACAAC TCCCAGAATA ACTCTACGGT TATCAACCAA TCCGTGGCTG GTCAGCATAC GGCTTACATA TCGCAGGATG GCGATGGCAA CTTCAACAGT TTCAATAACA CGGTAGCGGT TAACCAAACC GGGAGCGGCA ATAAAGCGGA TGTTCGTCAG TTGGGCATTG ATGCCAATAA AAATGGCCAG GGAGGCAGTT ACAATAACGT GGCAAACGTT ACCCAGTCCA ATCAACTAAA TCAGGCATTT ATCGTTCAGA AGGATTTGAG CGCCTTCAAC ACGGCAACCA TCAATCAGGC CGGGGTTAAT GATATAGGGA CCATTACCCA GTCGATAAAC TCAATCGCTA ATAACGCAAC GATTAATCAG GGCGCATTTA GCAGCGGCAA CAACAGAGCG ACGATCACGC AGCAGCAATC TGCGCCTGAG GGTGGTTTGG GCGGAAACTC AGCTACCATT AATCAGAACT TACTGGCAGC GGGCAGTGCG AATATTGCAA CCATTGTGCA GGGATTTCTA CCCTCAGTTA GTAACTCAAA TGCCAATCTG GCAACCATCA GTCAGGAAGG CAGTTCGAAC CAGGCTCGTC TGCAACAAAC GGGGGATCTA AACGTAGCGA CGATCATGCA GACCGGCAAC GGCAACATCG TTCGAAATGC GGATGCATCC CTTAACTCCT CGGCTCTTCA GCAAGGGTCG AACAACAAAC TGACCGTAGA ACAGATAGCC GGATCCAGTG GCAACATCGC GAACGTAGCG CAAATCGGTT CGGATAATAT TGCCAATATC CTGCAAAATG GTTCAGCTAA TACCGTCAAC TTGTCGGAGA TCGGCAATGG TCAAAAAATC TCCGTTTCAC AGTCGGGCAC TGGTAATACA GTAACCATCA GCCTTATTGG TAACTAG
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Protein sequence | MKKIILTGTA IVALAAACFA QNNTSTISQS GNQQSAGATQ KGKDLISTIV QTSAGGITNV GNFAKTVQKS SSLLSEKNQA IINQLGTAYG SATIEQEGVG NQSTISQKNN NAESSGDGNL VTTFQRGFNQ VLTVNQNDNS KGNLVTMRQE NTGTAQTATV DQNNVSTRNS ATTNQFGNNN TLSISQSNNS NNNTANVRQG FAPNMGASAF NATALVEQNG GALGSSSGNE ATITQINRAS NIAKIFQNNG SGGIGEAGND VTINQSGVLG SIASVSQSNN SQNNSTVINQ SVAGQHTAYI SQDGDGNFNS FNNTVAVNQT GSGNKADVRQ LGIDANKNGQ GGSYNNVANV TQSNQLNQAF IVQKDLSAFN TATINQAGVN DIGTITQSIN SIANNATINQ GAFSSGNNRA TITQQQSAPE GGLGGNSATI NQNLLAAGSA NIATIVQGFL PSVSNSNANL ATISQEGSSN QARLQQTGDL NVATIMQTGN GNIVRNADAS LNSSALQQGS NNKLTVEQIA GSSGNIANVA QIGSDNIANI LQNGSANTVN LSEIGNGQKI SVSQSGTGNT VTISLIGN
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