12 homologs were found in PanDaTox collection
for query gene Shewmr4_0168 on replicon NC_008321
Organism: Shewanella sp. MR-4



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008321  Shewmr4_0168  hypothetical protein  100 
 
 
135 aa  280  5.000000000000001e-75  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_0163  hypothetical protein  98.52 
 
 
135 aa  277  3e-74  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_0168  Ig family protein  97.5 
 
 
3544 aa  177  4e-44  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_0189  fibronectin type III domain-containing protein  92.5 
 
 
2522 aa  171  2.9999999999999996e-42  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009997  Sbal195_0170  outer membrane adhesin like proteiin  83.75 
 
 
3699 aa  157  3e-38  Shewanella baltica OS195  Bacteria  normal  normal  0.388732 
 
 
-
 
NC_009052  Sbal_4189  Ig family protein  83.75 
 
 
2503 aa  156  7e-38  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_0166  putative outer membrane adhesin like proteiin  82.5 
 
 
3699 aa  155  2e-37  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_3550  fibronectin, type III domain-containing protein  81.25 
 
 
2476 aa  154  3e-37  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_0223  fibronectin, type III  53.75 
 
 
1911 aa  104  5e-22  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_3728  cadherin  53.75 
 
 
3089 aa  103  6e-22  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_013457  VEA_000465  fibronectin type III domain protein  35 
 
 
2839 aa  49.7  0.00001  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_3174  dystroglycan-type cadherin domain-containing protein  28.4 
 
 
2715 aa  43.5  0.0009  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>