Gene Shewmr4_0168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0168 
Symbol 
ID4250696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp189257 
End bp189664 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content44% 
IMG OID638116711 
Producthypothetical protein 
Protein accessionYP_732306 
Protein GI113968513 
COG category 
COG ID 
TIGRFAM ID[TIGR03304] outer membrane insertion C-terminal signal 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTCAA AGTACAAGGG GCTGAATGAC GACTCACTTG CATTTTATTT CGGGTTTACC 
TCGTTCAGGG CCAACATTAC TTGTGGGAGT TTTGAGTCAA AACCCATATT TCCTTACTTC
ACAACTGCAA TAAGTTGTCC TGATGCTAAT GGAGGCGGCG GAGGCTTGCA GCATCAAGGC
TGGCGTTTTG AGGTGCCCGT TGGCTTGTTC CATTGGCAAG CGGATATTAG TAGTAGCATG
GGCAATACCA CGATCAAGAC CGACTTAGAT GGCACCGATT GGTATGCGGG AGTGCGTTTC
AGTTACCAAT TTAGTGATGC TTGGTCTGTA GGTTTAGGAT ATCAATACAT TGATATTGAA
CCGAATGACC TATTGAGCTA TCAACTCAAT CTGCGTTATC AGTTTTAG
 
Protein sequence
MISKYKGLND DSLAFYFGFT SFRANITCGS FESKPIFPYF TTAISCPDAN GGGGGLQHQG 
WRFEVPVGLF HWQADISSSM GNTTIKTDLD GTDWYAGVRF SYQFSDAWSV GLGYQYIDIE
PNDLLSYQLN LRYQF