Gene Sden_0223 details

Gene Information

• Locus tag: Sden_0223
• ID: 4017943
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella denitrificans OS217
• Kingdom: Bacteria
• Replicon accession: NC_007954
• Strand: +
• Start bp: 244271
• End bp: 250006
• Gene Length: 5736 bp
• Protein Length: 1911 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 637954199
• Product: fibronectin, type III
• Protein accession: YP_561243
• Protein GI: 91791592

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATATTT TGTTGAAAAA CCTTTACAGG TCGTGTTTTG AACGCTTCTG TAAAAGAAGT 
AATGTATTAA TAGAAAAGAG GCCATTTACA CTCTTCTTTC GGTGGTTGCT TATCTTGCCA 
TTGTTGCTTT GTTCCAATCA GCTTATGGCG GCTAAGTTTA CTATGTCGAT ATACACTGGT 
GGGGGAACGC CAACAGTAAT GACAACAGCA GATGATGGTA CTACGACTTT GACGGCCACA 
CGTTCTGATG GCGGTAATCT CGCTGGTGTA TCATCAGGAT TTTTAGACCC CAGTGTCATG 
AACGGAGCTG ATACTTATAC AGTGACATTC AATGTTCCAA TCACCATATC TTCGATTCAA 
ATAGCAGAGT TTACTAATAA CTCAACAGGC AACCATTATG TGCTGACGCC CAATGTTGGC 
ACACCTTTTA GCATTGCAGA TAACGACGGC GCGCTGGCGG GCAGTGTTAC CACACATGCA 
CCCTCTAATT GGATTGGAGT AACATCGTTA ACCTACTCTT ACTCGGCCTC GGGTTGGCGA 
AATGGCCTTG ATAACTTAGT GTTCACTGTT ACCGCCCCAC CAAGTATTAC CAGTGCCAAT 
TACGATGCCA GCACTGGGGT GTTAGCGGTC ACAGCACCTA GCATGACTAC GGGTGACACC 
ATAGATGTGA GTAAACTGAC GTTAACTGGT CGCAATGACG CCACTCATAC CCTTACTAGC 
TCCAATGTGA CAGCCAGCAG CTCAAGCGCT TTTTCTGTCA CGTTAAATGC TGCCGATAAA 
CTGGCAATTA ACGGTCTATT AAATCAAAAC GGTTTTGATG CGATTAACGG TACCGCCTAT 
AACTTGGCCG CTGCTGCTAA TTGGAATATC ACAAAATCAG CACCAGCAGA TTTAACAGGC 
AATAGCATCA CTGTGAGTAA TGTGAGTGCG CCCACCATTA CCTCTGCCAC TTACGATAGC 
AGCACCCACG TACTCACCGC CACAGGTACC AATTTGGTTG GTCTTCCCGG TGCCAACAAT 
GACATTAGCG TTAGTCTATT AACTCTTACG GCAGAAGGTG GCGCGACCTA TACTTTGACG 
TCTCCAGATG TCGAAGCTAC CAGCTCGAGC TCATTTTTCG TTACCCTAAA TGCCACTGAC 
TATGGCGTGG TTGAGACCAT TTTCAATAAA AATGGCACCA GCTCGACTAG TGGCACGACT 
TACAATTTAG CCGCAGCCGA TGACTGGAAC AGTGAGATCA CTGGCGGTAA CATTGCAGAT 
GCCTCTAATG CTATTACAGT ATCGAATGTT TCTTTGCCTT CCATTAGCAG TGCAACTTAT 
GATGCCAGTA CTGGAGTGTT AGTGGTCACT GGTAGCGGAC TTGTGTCTAA AACTGGCGGA 
ACAAATGATA TCGATATCTC CAAATTCACC CTCAGTGGTG ATGCGAGCAG TTATAGCTTA 
ACGTCAAGCA GCGTTGAAAT TACCAATGGC AGTAGTTTTT CAGTGCCCCT TAATAGTACT 
GATAAAAACG AGCTGATCAG TCGCCTCAAT AAAAATGGCA CCAGCTCAAA TGGTGCCGTG 
ACTTATAATA TTGCTGCGGC AGATGATTGG AATACAGGCG CGGATCCTGC GCTTAATATT 
GCGGATTTGA CTGGTAACGG CATCACTGTA AGCAATGCCG CTACAATACC AGGTGCACCA 
ATAATTGGTT CAGCCACTTC TGGCGATGGG CAAGCGAGTG TTAGTTTCAG CGCACCCGTT 
AGCAATGGCG GAGCAGCAAT TACGGCTTAT ACCGTCACTT CAAGCCCTGG CGGTTTCACG 
GCCACAGGTA CGGCTTCACC ACTCACAGTG ACAGGTCTAA CTAATGGTAC TGCCTACAGC 
TTTAACGTAA CAGCCACAAA TTTAGTTGGG GAAAGCTCAG CCTCTAGTGC ATCTAATAGC 
GTTACGCCCA TGGGTTCGCA AACAATAACC TTCGCTAATC CTGGTGCGCA AAACTTTGGT 
ACTACTCCAA CACTAACGGC AACTTCAAGT TCAGGTTTAG TGCCTGTGTT TACCTCATCG 
ACTGCTGGTG TGTGTAGCAT CACCAGTGGC GGTGCCTTGA CTTTAGTGAC TGCGGGCACT 
TGTACTATTA ATGCGAATCA AGGGGGTAAT AGTGCCTACC TACCGGCAGC TCAAGTGAGT 
CAGAGTTTCA CTGTTAATGC CGTGGTGGCA AGTTCCCCTA CAATCGGCAC AGCAACCGCA 
GGTGATGCTT CGGCTAGCGT GAGTTTCAGC GCGCCTGCTA GCAATGGCGG CGTAGCGATT 
ACGGCTTATA CCGTTACCTC AAGCCCTGGT GGACTCACTG CGACGGGCGC AGCATCGCCT 
CTTACAGTGA CAGGTCTAAG TAACGGCACG GCTTACAGCT TTAGTGTCAC GGCCACCAAT 
TCAGCCGGTG TCAGTGCCGC CTCTGCTGCA TCTAACAGCG TGACCCCACA GAGTGCTAAC 
AGCGCGCCAG TGGCGACTAA TGCCAGCGTG AGTTTGGATG AAGATACTTC CTTATCCATA 
AGCTTTACTG CCACGGATGC AGAAGATGAT GTACTTAGTT TTGAAGTGGT AACCCCGCCG 
ACATCGGGCA AGTTAGTTAA GCACGGTTCT GTGTGGTTAT ACACCCCAGA TGCGGACTTT 
AACGGTGATG ACAGTGTGCG CTTTATTGCC AAAGATGCCG AGCTAAGTTC TACCCCTGGC 
GTGGTGAGCA TCAAGGTCAA TCCGGTTAAC GATGAACCCA AGGCCGTGGA TGACAGCATC 
AGCCAGAGCC TGTCCACGGA CAACAGCTAT ACCTTAGCCG TATTGGACAA TGACACCGAC 
GTCGATGGTG ATACCTTGAC TATCGATGGC GCGGCGGCCG ATGTGGGCAG CGTGCAAATC 
GTTAGCTCAC AGCTTAAATA CCAAGCGCCA ACGGGGTTTG TTGGCCCAGT GGCACTGCGT 
TATAGCATTT CCGATGGCCA TAAGGGTCGC AGTAATGCCA AGGTGCAATT GCTTATTACC 
GGTGAAAACT CAGCTGGTGC CCCTGTGATT ACCGTGCCTG CAGACATTAC TGCGAATGCG 
ACAGGCTTGT TCACTAAGCT TAAGCTTGGC GTCGCGACAG CGGTGGATGC CTCAGGCAAG 
AAGCTTGCGG TATCTTTGGT GAACACTAAG CAACTGTTTG CACCGGGTGA GCATGTCGCC 
TATTGGCAAG CCACAGACAG TCAAGGTCGC AGCGCGATTA AGTCACAAAA AGTGACGGTA 
AAACCGCTGA TATCCATTAG CCGCAATCAA GTGGTCAGTG AAGGCAGTGA AGCTAAGGTA 
AGCGTGTTCT TAAACGGCCC ATCACCTCAG TACCCTGTGA GCGTACCTTA TACCGTGTCT 
GGCAGCAGTG ACGGCAATGA CCATGACTTA GTCGATGGTG TGGTGGAGAT AACCTCAGGT 
TTATCTGCAA GCTTTAGCGT TAATGTGTTC GATGATGGGG TCACGGAAGC GGATGAAGAG 
TTAGTTATCA GCTTAGACTC AGGCCTGAAC CTCAGTGGTC AACGTGAGAC GCGGTTATTA 
ATTACTGAAG CGAATATTGC GCCTCAGGCG AGCATAGTGG TGACCCAGTC GAATGAACAG 
CGCACTCAAG TGAGCAAAGC GGAAGGCAAG GTGTACATCA AGGCGAAAAG CCGCGATGTG 
AACCCGCAAG ATAGCCTCAC TGAGGTCTGG TCCACAGGCG CACTGGTGTT AGACACAGAT 
GCCGATGGCA GCTACTTTGA CCCAAGCACG CTCGATGCAG GCAGTTACCC CATTAGCTTA 
GTGGTGACTG ACGATGGTAC GCCGCAGTTA TCCACCAAGG TGCAGTTAAC CTTGTTGGTA 
AAAGACAGCC TACCTGTGTT GACTGGCGCG GATAGCGATG GCGATTTAAT TCCTGATAAC 
CAAGAAGGCT TTGCCGACAC AGACGGTGAT GGCATTGCGG ATTATTTGGA TGCGATTAAC 
GAGTGTAACG TGCTGCAAGA GCAGGCTAGT TCGCAACAAA CTTTCCTAGC TGAAAGCCAG 
TCTGGGGTGT GTTTACGCTT AGGTAATACG GCGCAGCTTA ATGGTAGCCA AGGCATTCAA 
GTGCCAGACA GTGCCCTCAT TAAGGATACG CTAGCGGATA ACCTGGGTGG TCTGTTCGAT 
TTTGAACTTA CTGCTATCCC TAGATTGGGT GCCAGTGTTG CGGTTGTTAT TCCTCAAGCG 
CGGCCCGTGC CTACCAATGC CGTGTATCGC AAGTTTGTGC GCGGTAACTG GCAGGACTTT 
GTGTTAAATA CCAACAATTC AGTGATGTCG AGTGCGGGTA ATTCGGGTTA TTGCCCACCG 
CCTGGCGCTG CACAGTGGCA ACCGGGATTA ACCGAAGGTC ACTGGTGTGT GCAGTTAAGC 
ATAGAAGATG GCGGTCCTAA CGATGATGAC GGTATTGCCA ATGGCACTAT TGTTGACCCG 
GGCGGGGTGG CTGTGATGCT TAATAACAAC AGTTTACCAG TGGCGGTTGC CGATGCGGTG 
ATAGTACCTG TGAACCAGAG CACTGAGGTT GATGTGCTGG CGAACGATAC CGACGCAGAC 
GGTGATACCC TAACTGTTCG TCAAGTGAGC AGCCAGTTTG GCACGGCAGT GGTGCTGGAT 
AACCAGCAGA TAAGCTATAC CCCTGCGGCT GATTTTATCG GCACCGATGT GTTGGTATAC 
AGTATCAGCG ATGGCAAGGG TGGCACCGCC AGCAGTGAAC TCACGGTAAC CGTGGTGGCC 
AACCGTGCCC CCGTCGCCGT GGATGACATG GCGAGCACCG ATGATAAGAC GGTATTAATA 
CTGAATGTCC TCGCTAACGA CAGCGACCCA GACAACCAGG CATTAAGCAT TATTGCGGCC 
AGTGCCGAGC AAGGGAGTGT GATGATAGAA AACAACCAAC TGCGTTATAC CCCTAAAACG 
GGTTTTGAAG GCATAGACAC AGTGAGCTAC CGCATCAGCG ATGGTTTGGA CGGTGAAGCG 
ACGGCCAATG TGATGGTCAG CGTGAAAGCG TACAAAGCTC AAGTGGTGGA TAACCAATCT 
GGTGGTAGCC TAGGCTGGGC TTGGGTAGCG GCACTGCTAA TGGCGCTGAT GTTACGCGTT 
AGCAATAGGC TTAACCTAAG ACTTAAGGGC AAGCTGTTGC TGGCTGGGCT CCTTTCCATG 
GCGGGTGTCA TGCAGGTCCA AGCGGCGCCG AGCCCTTGGT ATCTGGACGC GAGCTTAAGT 
GTGAGCGAGA CAGATAAAAC CCAAATGGAG CTGCAGCAAG AAGTCACGGC AGGGACAATC 
AGCGGTTTTG ATAACTCAGA CACAGGCGTG GGCTTAAGTC TGGGCTATCA AGTGACGCCA 
CTGCTGGCAT TTGAGCTTGG CTACCTGGAT TTAGGTGAAG GCTCGGCGCA AATCAGTGGC 
GAAAGCTTAG ATGCGGGTCA ATACCATGAG CTGATGAAGT TGGTGTCACC TGTGTTACCA 
CAAGGGGTGA CTGTGGGTGC AAGGTTTACC TTAATGGAAC ATCAAGGCTG GCGCTTCTCA 
GTGCCAGTTG GGGTGTTTAT CTGGGAGTCT GAGTTACACA GTGACTCACA GGGTCAGCGC 
CTGACCACTA AACTCGATGA CACAGATTGG TACGCTGGCA TGCGCTTTGA CTATGCCTTG 
GCTCAGCACT GGTCTATGGG GCTGGGGATT AACTACTATG CCTTGGCGCC AAATGATGTG 
TTAAGTTACC AGCTCAGTGT GCGTTACCAG TTCTAA 

 

Protein sequence

MNILLKNLYR SCFERFCKRS NVLIEKRPFT LFFRWLLILP LLLCSNQLMA AKFTMSIYTG 
GGTPTVMTTA DDGTTTLTAT RSDGGNLAGV SSGFLDPSVM NGADTYTVTF NVPITISSIQ 
IAEFTNNSTG NHYVLTPNVG TPFSIADNDG ALAGSVTTHA PSNWIGVTSL TYSYSASGWR 
NGLDNLVFTV TAPPSITSAN YDASTGVLAV TAPSMTTGDT IDVSKLTLTG RNDATHTLTS 
SNVTASSSSA FSVTLNAADK LAINGLLNQN GFDAINGTAY NLAAAANWNI TKSAPADLTG 
NSITVSNVSA PTITSATYDS STHVLTATGT NLVGLPGANN DISVSLLTLT AEGGATYTLT 
SPDVEATSSS SFFVTLNATD YGVVETIFNK NGTSSTSGTT YNLAAADDWN SEITGGNIAD 
ASNAITVSNV SLPSISSATY DASTGVLVVT GSGLVSKTGG TNDIDISKFT LSGDASSYSL 
TSSSVEITNG SSFSVPLNST DKNELISRLN KNGTSSNGAV TYNIAAADDW NTGADPALNI 
ADLTGNGITV SNAATIPGAP IIGSATSGDG QASVSFSAPV SNGGAAITAY TVTSSPGGFT 
ATGTASPLTV TGLTNGTAYS FNVTATNLVG ESSASSASNS VTPMGSQTIT FANPGAQNFG 
TTPTLTATSS SGLVPVFTSS TAGVCSITSG GALTLVTAGT CTINANQGGN SAYLPAAQVS 
QSFTVNAVVA SSPTIGTATA GDASASVSFS APASNGGVAI TAYTVTSSPG GLTATGAASP 
LTVTGLSNGT AYSFSVTATN SAGVSAASAA SNSVTPQSAN SAPVATNASV SLDEDTSLSI 
SFTATDAEDD VLSFEVVTPP TSGKLVKHGS VWLYTPDADF NGDDSVRFIA KDAELSSTPG 
VVSIKVNPVN DEPKAVDDSI SQSLSTDNSY TLAVLDNDTD VDGDTLTIDG AAADVGSVQI 
VSSQLKYQAP TGFVGPVALR YSISDGHKGR SNAKVQLLIT GENSAGAPVI TVPADITANA 
TGLFTKLKLG VATAVDASGK KLAVSLVNTK QLFAPGEHVA YWQATDSQGR SAIKSQKVTV 
KPLISISRNQ VVSEGSEAKV SVFLNGPSPQ YPVSVPYTVS GSSDGNDHDL VDGVVEITSG 
LSASFSVNVF DDGVTEADEE LVISLDSGLN LSGQRETRLL ITEANIAPQA SIVVTQSNEQ 
RTQVSKAEGK VYIKAKSRDV NPQDSLTEVW STGALVLDTD ADGSYFDPST LDAGSYPISL 
VVTDDGTPQL STKVQLTLLV KDSLPVLTGA DSDGDLIPDN QEGFADTDGD GIADYLDAIN 
ECNVLQEQAS SQQTFLAESQ SGVCLRLGNT AQLNGSQGIQ VPDSALIKDT LADNLGGLFD 
FELTAIPRLG ASVAVVIPQA RPVPTNAVYR KFVRGNWQDF VLNTNNSVMS SAGNSGYCPP 
PGAAQWQPGL TEGHWCVQLS IEDGGPNDDD GIANGTIVDP GGVAVMLNNN SLPVAVADAV 
IVPVNQSTEV DVLANDTDAD GDTLTVRQVS SQFGTAVVLD NQQISYTPAA DFIGTDVLVY 
SISDGKGGTA SSELTVTVVA NRAPVAVDDM ASTDDKTVLI LNVLANDSDP DNQALSIIAA 
SAEQGSVMIE NNQLRYTPKT GFEGIDTVSY RISDGLDGEA TANVMVSVKA YKAQVVDNQS 
GGSLGWAWVA ALLMALMLRV SNRLNLRLKG KLLLAGLLSM AGVMQVQAAP SPWYLDASLS 
VSETDKTQME LQQEVTAGTI SGFDNSDTGV GLSLGYQVTP LLAFELGYLD LGEGSAQISG 
ESLDAGQYHE LMKLVSPVLP QGVTVGARFT LMEHQGWRFS VPVGVFIWES ELHSDSQGQR 
LTTKLDDTDW YAGMRFDYAL AQHWSMGLGI NYYALAPNDV LSYQLSVRYQ F