14 homologs were found in PanDaTox collection
for query gene Shewana3_0922 on replicon NC_008577
Organism: Shewanella sp. ANA-3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008577  Shewana3_0922  hypothetical protein  100 
 
 
155 aa  303  4.0000000000000004e-82  Shewanella sp. ANA-3  Bacteria  normal  0.636561  normal 
 
 
-
 
NC_009052  Sbal_0907  hypothetical protein  84.97 
 
 
154 aa  230  6e-60  Shewanella baltica OS155  Bacteria  hitchhiker  0.00439506  n/a   
 
 
-
 
NC_008321  Shewmr4_0923  hypothetical protein  96.13 
 
 
155 aa  225  2e-58  Shewanella sp. MR-4  Bacteria  normal  0.920315  normal 
 
 
-
 
NC_008322  Shewmr7_0958  hypothetical protein  96.13 
 
 
155 aa  225  2e-58  Shewanella sp. MR-7  Bacteria  normal  normal  0.5733 
 
 
-
 
NC_009665  Shew185_3456  hypothetical protein  84.31 
 
 
154 aa  218  3e-56  Shewanella baltica OS185  Bacteria  hitchhiker  0.00269733  n/a   
 
 
-
 
NC_008700  Sama_2658  hypothetical protein  56.38 
 
 
170 aa  169  9e-42  Shewanella amazonensis SB2B  Bacteria  normal  0.0122085  normal 
 
 
-
 
NC_007520  Tcr_0415  hypothetical protein  29.33 
 
 
153 aa  77  0.00000000000008  Thiomicrospira crunogena XCL-2  Bacteria  normal  0.0427258  n/a   
 
 
-
 
NC_013422  Hneap_1801  hypothetical protein  34.21 
 
 
148 aa  62  0.000000003  Halothiobacillus neapolitanus c2  Bacteria  hitchhiker  0.0066669  n/a   
 
 
-
 
NC_010682  Rpic_1885  putative transmembrane protein  29.73 
 
 
155 aa  49.7  0.00001  Ralstonia pickettii 12J  Bacteria  decreased coverage  0.00765988  normal  0.505321 
 
 
-
 
NC_012856  Rpic12D_1556  hypothetical protein  29.73 
 
 
155 aa  49.7  0.00001  Ralstonia pickettii 12D  Bacteria  normal  0.969834  normal  0.226901 
 
 
-
 
NC_003296  RS01728  hypothetical protein  29.91 
 
 
159 aa  47.8  0.00005  Ralstonia solanacearum GMI1000  Bacteria  normal  0.906647  normal 
 
 
-
 
NC_003295  RSc0612  hypothetical protein  34.62 
 
 
192 aa  44.7  0.0004  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_2628  hypothetical protein  33.33 
 
 
176 aa  40.8  0.007  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0242868  normal 
 
 
-
 
NC_007404  Tbd_0707  transmembrane protein  27.27 
 
 
157 aa  40.8  0.008  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.192149  normal  0.111144 
 
 
-
 
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