Gene Sama_2658 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2658 
Symbol 
ID4604905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3182069 
End bp3182581 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content53% 
IMG OID639782069 
Producthypothetical protein 
Protein accessionYP_928530 
Protein GI119775790 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0122085 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGTT TAAACGGATA TCCTGGCTGG TTTTTTTACC TGCTTATGCT GTCGATGACG 
CTTTGCGCCG CCACCGGGCT TGCCATGTAT CCCTGGGTGT TGGAGTTTAA ACTGGAATGG
GAACTACCCA TGGCACTCAA TGGTCAGTGG CGCTTGCCTC TGGTGAGCAC GCATGCCCTC
AGCGCTGCCG TGCTGCTGAT GCTGCTCGGT GCACTGTGGC AAGTTCATAT GCGCGCCGGC
TGGCGTAAAA AGGAAAACCG TTTCAGCGGG ATTTTTATGG CATTTTCCAT AGTACTTCTG
ATGCTGACAG GCGTTGGACT TTACTATCTG AGCGCAGAAT CGGCGCAGTT GGCAGCAAGC
CTTGCACACT CAGTGCTGGG ATTATCTCTG GTGGGACTGT TCACCTGGCA CTGGATACAA
GGTCACAGGG TAAGGATGCA AAAAATCCAC CACGCGGGCA GCAAGCACCG CAGCCCCCGA
CAGGTATTGA GGCAGCATTC ATTGGCCGAA TAA
 
Protein sequence
MKRLNGYPGW FFYLLMLSMT LCAATGLAMY PWVLEFKLEW ELPMALNGQW RLPLVSTHAL 
SAAVLLMLLG ALWQVHMRAG WRKKENRFSG IFMAFSIVLL MLTGVGLYYL SAESAQLAAS
LAHSVLGLSL VGLFTWHWIQ GHRVRMQKIH HAGSKHRSPR QVLRQHSLAE