Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_3456 |
Symbol | |
ID | 5370737 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 4104179 |
End bp | 4104643 |
Gene Length | 465 bp |
Protein Length | 154 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640831716 |
Product | hypothetical protein |
Protein accession | YP_001367646 |
Protein GI | 153001965 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00269733 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGAAAT TAACTGGCTA TCCAAATTGG TTTTTTTGGC TAATCATTCT TACCATTAGC GTCACCACGC TCACAGGCTT GTTTATGCTG CCTTGGGTGA TTGAGTTTAA GTTGCAGTGG GAAGTGGATT TTGGCCTCAG CGGTGAACTA CGGTTACCCG CAGTGGTGTT GCATGTGTTG TTAGGTTGGT TGCTGTTGAT GCTACTTGGT GCACTTTGGC ACAGTCATAT TCGGGCTGGA TGGCGTAAAA AATTGAACCA TTGGAGTGGC TTAGTGATGT CACTCAGTCT TATCACCTTA GCGTTAACGG GTGTGGGACT GTATTACTTG AGCTCAGAGT CAGCCCAACT GTTTGCCAGT TTATTGCATA CGTTTTTGGG GATGTTATTG TTTTCAGGTT TTGTTTGGCA TTATTACCAT GGCCGTAAAA TTCGCCTTCA CTCCCTTAGG CGTCACCGTA GCTGA
|
Protein sequence | MKKLTGYPNW FFWLIILTIS VTTLTGLFML PWVIEFKLQW EVDFGLSGEL RLPAVVLHVL LGWLLLMLLG ALWHSHIRAG WRKKLNHWSG LVMSLSLITL ALTGVGLYYL SSESAQLFAS LLHTFLGMLL FSGFVWHYYH GRKIRLHSLR RHRS
|
| |