10 homologs were found in PanDaTox collection
for query gene Shel_20390 on replicon NC_013165
Organism: Slackia heliotrinireducens DSM 20476



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013165  Shel_20390  hypothetical protein  100 
 
 		 471 aa  964    Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.123185  normal  0.078354 
 
 
-
 
NC_010338  Caul_0323  hypothetical protein  28.79 
 
 		 493 aa  157  5.0000000000000005e-37  Caulobacter sp. K31  Bacteria  normal  0.183505  normal  1 
 
 
-
 
NC_004347  SO_1460  type I restriction-modification system, S subunit, putative  27.49 
 
 		 446 aa  149  1.0000000000000001e-34  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011882  Cyan7425_5291  hypothetical protein  22.5 
 
 		 555 aa  77.8  0.0000000000004  Cyanothece sp. PCC 7425  Bacteria  normal  0.673527  n/a   
 
 
-
 
NC_009012  Cthe_1144  restriction modification system DNA specificity subunit  24.52 
 
 		 473 aa  75.5  0.000000000002  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_002950  PG0545  hypothetical protein  26.61 
 
 		 701 aa  58.9  0.0000002  Porphyromonas gingivalis W83  Bacteria  n/a    normal  1 
 
 
-
 
NC_010085  Nmar_0610  restriction modification system DNA specificity subunit  33.33 
 
 		 730 aa  50.8  0.00005  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal  1 
 
 
-
 
NC_014150  Bmur_0920  hypothetical protein  19.87 
 
 		 460 aa  50.1  0.00008  Brachyspira murdochii DSM 12563  Bacteria  normal  1  n/a   
 
 
-
 
NC_002947  PP_4742  type I restriction-modification system, S subunit  26.97 
 
 		 576 aa  47  0.0007  Pseudomonas putida KT2440  Bacteria  normal  0.266617  hitchhiker  0.00441093 
 
 
-
 
NC_011146  Gbem_3246  hypothetical protein  24.79 
 
 		 454 aa  47  0.0007  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
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