9 homologs were found in PanDaTox collection
for query gene Sden_0913 on replicon NC_007954
Organism: Shewanella denitrificans OS217



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007954  Sden_0913  cupin 2, barrel  100 
 
 		 104 aa  216  7.999999999999999e-56  Shewanella denitrificans OS217  Bacteria  normal  1  n/a   
 
 
-
 
NC_003910  CPS_1913  hypothetical protein  69.31 
 
 		 104 aa  156  7e-38  Colwellia psychrerythraea 34H  Bacteria  normal  0.425283  n/a   
 
 
-
 
NC_014212  Mesil_1710  Cupin 2 conserved barrel domain protein  28.12 
 
 		 121 aa  48.9  0.00002  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013946  Mrub_1794  Cupin 2 conserved barrel domain-containing protein  30.77 
 
 		 110 aa  46.2  0.0002  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010505  Mrad2831_3954  cupin 2 domain-containing protein  35.21 
 
 		 105 aa  45.1  0.0004  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.266948 
 
 
-
 
NC_010831  Cphamn1_2403  Cupin 2 conserved barrel domain protein  30.43 
 
 		 115 aa  44.7  0.0004  Chlorobium phaeobacteroides BS1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010511  M446_6850  cupin 2 domain-containing protein  33.78 
 
 		 105 aa  43.1  0.001  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010623  Bphy_4525  cupin 2 domain-containing protein  32.05 
 
 		 147 aa  42.4  0.002  Burkholderia phymatum STM815  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011769  DvMF_1250  Cupin 2 conserved barrel domain protein  35.48 
 
 		 193 aa  40.8  0.006  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    hitchhiker  0.00015051 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>