Gene Cphamn1_2403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_2403 
Symbol 
ID6376098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp2565662 
End bp2566009 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content47% 
IMG OID642684884 
ProductCupin 2 conserved barrel domain protein 
Protein accessionYP_001960782 
Protein GI189501312 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAGTGA CATCGCAAGA GGCACTAAAA AGAAGCTTTG TCGGAGTTGA TTTTCTCCTG 
CTCTCTCATG GCAAGGAATC CATGGTGACG AAAATGCTGT ACAAAAATGG AAACACGGTG
CCGGGCCATA AGCATCCGAA CGAACAAAGC GGCTATGTAA TCTCCGGGAA ATACATACTT
ATACTTGAGG ATGCCAGGCA CAAAATCGGT CCCGGCGATT CATATACGAT TCCATCCAAT
GCAGAGCATG CCATTGAAAT TATCGAACCG GGGGAAGTGC TGGATTTTTT CAGCCCTCCG
AGACAGGATT ATCTCCGGCA TCATCAGGCC CCGATGCTAG ATATCTGA
 
Protein sequence
MIVTSQEALK RSFVGVDFLL LSHGKESMVT KMLYKNGNTV PGHKHPNEQS GYVISGKYIL 
ILEDARHKIG PGDSYTIPSN AEHAIEIIEP GEVLDFFSPP RQDYLRHHQA PMLDI