8 homologs were found in PanDaTox collection
for query gene Sde_0412 on replicon NC_007912
Organism: Saccharophagus degradans 2-40



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007912  Sde_0412  hypothetical protein  100 
 
 
539 aa  1115    Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_56140  hypothetical protein  25.7 
 
 
425 aa  64.7  0.000000004  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_4442  hypothetical protein  30.08 
 
 
388 aa  62.8  0.00000002  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.165117  normal 
 
 
-
 
NC_009439  Pmen_3319  hypothetical protein  24.73 
 
 
393 aa  57.8  0.0000005  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_4890  hypothetical protein  25.7 
 
 
422 aa  57.4  0.0000006  Pseudomonas aeruginosa PA7  Bacteria  normal  0.910905  n/a   
 
 
-
 
NC_012560  Avin_38360  hypothetical protein  24.88 
 
 
381 aa  56.2  0.000001  Azotobacter vinelandii DJ  Bacteria  normal  0.368005  n/a   
 
 
-
 
NC_004578  PSPTO_4320  hypothetical protein  27.52 
 
 
406 aa  53.9  0.000007  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.692532  n/a   
 
 
-
 
NC_007005  Psyr_4024  hypothetical protein  25.3 
 
 
405 aa  53.5  0.000008  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.535648  normal  0.0696113 
 
 
-
 
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