Gene Psyr_4024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4024 
Symbol 
ID3369560 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4792033 
End bp4793250 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content62% 
IMG OID637654382 
Producthypothetical protein 
Protein accessionYP_237092 
Protein GI66047251 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.535648 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0696113 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGCC GCACCGGGCT GCTGATCGGG CTGCTGGTCC TGTCATTACT GGCAGGCGGC 
GCGCTGTTTC TGAGCACCCA GCTCGAGCGC TACGAGAAAA CGGTCGATCA GGGCCCCTCG
CCAGAGGCGA AGGCCAATCC TTGGCTGGCG GCCGAACACT TTCTGCGTGG CCGCTCCCTC
ACAGTGAATA CCGTCGACAC GCTGGCTCAG CTTCCCGACC CGAGTCAGAG CACCCAGACC
CTGCTGCTGC TCGATGACCG GGAAGACATG ACCCCGGCGC AAACCCAAAC GCTGCTGAAC
TGGGCCGAGG CAGGCGGGCA CCTGCTGTTC GTCGCCGAAC AACTCTGGGA CGAACAAAAA
GGTCGCAGCG GTGACCTGCT GCTGGACAGT CTGCAGATTC ATCAGTACCT CACCAAAGAC
ATCAATGCCA AGGAACAGCA ACTGACCGAC GCTCAGCCGC CACTGCCCAT CCCGCTGATG
ACGCCCGCCC CCAAACACCA GAAAATACCT TGGCCAGAGC TGACTCGCCT GTACCTGGAA
AACGAGAGCG CCCCGGCCTA CATGAGTTTC GATCCGGCGT TTCACCTCGA AGACCCGGAA
GATCACGCCC AATCCTGGGC CAACAGCGCC GATGCCACGC ACCTGCTGCA GATAAGCCGG
GGCAATGGGC TGATCACCGT TGTCACGGAC GCCAACCTGT GGAAAACCCG CTCGATCGGC
CACTATGACA ATGCCTGGCT GCTCTGGTAT CTGACGCAGG ACAGCCAAGT GACTTTGGTG
CTGCAAACCG AACACGACAA CCTGCTGAGC CTGTTACTGC GCAACTATCC TCAGGCACTG
CTGACGCTGG CACTGCTGAT TGCTCTGGGT CTGTGGCACA TCGGTCTGCG CGAGGGCCCG
CTGCGGCGGC CCGCGCCACT CGCACGCCGC CAACTGACCG AGCACCTGCG CGCCAGTGCC
GAGTTCCTGC GCAAACACAC CGGGCAGCAG ACGCTGATCA AACGCCTGCA ACAGGACATA
CTGCGTCGCG CCCGCCAACT GCATCCCGGT TTCGAGCGGC TGGTCATTGC CGAACAATGG
CAAGTGCTTG CTCGCCTGAC CCGTCAGCCC ACCAGCGCCA TCAGCGACGC GCTGCGCCCT
CGCCCGCCGC AACGCCTGTC ACACAGTGAA TTCACCCGCC AGGTAGCCCA CCTGCAAACA
ATCAGGAATG CCCTATGA
 
Protein sequence
MTRRTGLLIG LLVLSLLAGG ALFLSTQLER YEKTVDQGPS PEAKANPWLA AEHFLRGRSL 
TVNTVDTLAQ LPDPSQSTQT LLLLDDREDM TPAQTQTLLN WAEAGGHLLF VAEQLWDEQK
GRSGDLLLDS LQIHQYLTKD INAKEQQLTD AQPPLPIPLM TPAPKHQKIP WPELTRLYLE
NESAPAYMSF DPAFHLEDPE DHAQSWANSA DATHLLQISR GNGLITVVTD ANLWKTRSIG
HYDNAWLLWY LTQDSQVTLV LQTEHDNLLS LLLRNYPQAL LTLALLIALG LWHIGLREGP
LRRPAPLARR QLTEHLRASA EFLRKHTGQQ TLIKRLQQDI LRRARQLHPG FERLVIAEQW
QVLARLTRQP TSAISDALRP RPPQRLSHSE FTRQVAHLQT IRNAL