Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4024 |
Symbol | |
ID | 3369560 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 4792033 |
End bp | 4793250 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637654382 |
Product | hypothetical protein |
Protein accession | YP_237092 |
Protein GI | 66047251 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.535648 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0696113 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCGCC GCACCGGGCT GCTGATCGGG CTGCTGGTCC TGTCATTACT GGCAGGCGGC GCGCTGTTTC TGAGCACCCA GCTCGAGCGC TACGAGAAAA CGGTCGATCA GGGCCCCTCG CCAGAGGCGA AGGCCAATCC TTGGCTGGCG GCCGAACACT TTCTGCGTGG CCGCTCCCTC ACAGTGAATA CCGTCGACAC GCTGGCTCAG CTTCCCGACC CGAGTCAGAG CACCCAGACC CTGCTGCTGC TCGATGACCG GGAAGACATG ACCCCGGCGC AAACCCAAAC GCTGCTGAAC TGGGCCGAGG CAGGCGGGCA CCTGCTGTTC GTCGCCGAAC AACTCTGGGA CGAACAAAAA GGTCGCAGCG GTGACCTGCT GCTGGACAGT CTGCAGATTC ATCAGTACCT CACCAAAGAC ATCAATGCCA AGGAACAGCA ACTGACCGAC GCTCAGCCGC CACTGCCCAT CCCGCTGATG ACGCCCGCCC CCAAACACCA GAAAATACCT TGGCCAGAGC TGACTCGCCT GTACCTGGAA AACGAGAGCG CCCCGGCCTA CATGAGTTTC GATCCGGCGT TTCACCTCGA AGACCCGGAA GATCACGCCC AATCCTGGGC CAACAGCGCC GATGCCACGC ACCTGCTGCA GATAAGCCGG GGCAATGGGC TGATCACCGT TGTCACGGAC GCCAACCTGT GGAAAACCCG CTCGATCGGC CACTATGACA ATGCCTGGCT GCTCTGGTAT CTGACGCAGG ACAGCCAAGT GACTTTGGTG CTGCAAACCG AACACGACAA CCTGCTGAGC CTGTTACTGC GCAACTATCC TCAGGCACTG CTGACGCTGG CACTGCTGAT TGCTCTGGGT CTGTGGCACA TCGGTCTGCG CGAGGGCCCG CTGCGGCGGC CCGCGCCACT CGCACGCCGC CAACTGACCG AGCACCTGCG CGCCAGTGCC GAGTTCCTGC GCAAACACAC CGGGCAGCAG ACGCTGATCA AACGCCTGCA ACAGGACATA CTGCGTCGCG CCCGCCAACT GCATCCCGGT TTCGAGCGGC TGGTCATTGC CGAACAATGG CAAGTGCTTG CTCGCCTGAC CCGTCAGCCC ACCAGCGCCA TCAGCGACGC GCTGCGCCCT CGCCCGCCGC AACGCCTGTC ACACAGTGAA TTCACCCGCC AGGTAGCCCA CCTGCAAACA ATCAGGAATG CCCTATGA
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Protein sequence | MTRRTGLLIG LLVLSLLAGG ALFLSTQLER YEKTVDQGPS PEAKANPWLA AEHFLRGRSL TVNTVDTLAQ LPDPSQSTQT LLLLDDREDM TPAQTQTLLN WAEAGGHLLF VAEQLWDEQK GRSGDLLLDS LQIHQYLTKD INAKEQQLTD AQPPLPIPLM TPAPKHQKIP WPELTRLYLE NESAPAYMSF DPAFHLEDPE DHAQSWANSA DATHLLQISR GNGLITVVTD ANLWKTRSIG HYDNAWLLWY LTQDSQVTLV LQTEHDNLLS LLLRNYPQAL LTLALLIALG LWHIGLREGP LRRPAPLARR QLTEHLRASA EFLRKHTGQQ TLIKRLQQDI LRRARQLHPG FERLVIAEQW QVLARLTRQP TSAISDALRP RPPQRLSHSE FTRQVAHLQT IRNAL
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