Gene Pfl01_4442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4442 
Symbol 
ID3717602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5002420 
End bp5003586 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content63% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_350170 
Protein GI77460663 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.165117 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAACCGGC GCGCGCTGTG GCTTCTGGGC GGTGCGCTGA TCGTCGCCCT GCTCGCTGTG 
CTGGGCATTT ATCTGTACCT CAAGGCCACG CCGTACCAGA CCGAAGTCGA TCACGGCCCG
TCCCCCGCTG CGCAAGCCAA CCCTTATCTG GCGGCGGAGA TGTTTCTGCG CGAGCGCGGG
ATCGACGTCA GCCATGCCGA AAGCCTTGCC GTGCTACCTG AAATCGATCC GCGCCAGCAC
ACGTTGCTGA TGTTCAACGA CCGCTCGAAA ATGACTCCGC GTCAGGTTGA CCAGGTATTG
AACTGGGCCC GGGCCGGCGG AAGGCTGGTG TTCGTCGCCG AATCGATCTG GGATGAAAAG
ACCGGCCAGA GCAACGACCT GCTGCTCGAC CGCGTGCAAC TGCGTCAATC CTTCAGCAAG
GATCTCAAGG ATCCGCCGCC GGATGCCGCC GAAGACCCGT TCCCGAATCT GACCAAACTC
TATCTGGAAG ACGAAGACGC ACCCGCCTAC GCCGGATTCG ACACCGCGTT CCACCTCGAC
GACCCGAAAA ACCTCGCCCA GGCCTGGGCC AACAGCGCGA AAGCCACGCA CATGATGCAA
CTGGCTTTCG GCCTCGGCAC GATCACCGTG GTCACCGATG CCGACCTGTG GAAAACCCCG
GCGATTGCGC AGCACGACAA TGCCTGGCTG CTCTGGTACC TCAGCGCCGA CACCGCCGTG
ACCTTGTTGT ACAACACCGA ACACGACGGT CTGTTGACCC TGCTCTGGCG CTACTTCCCG
CAAGCCATCG TCGCCTTGCT GGCGCTGATC GGTCTTTGGC TGTGGCATGT CGGCGTGCGT
CACGGTCCGG TGCAGGCGCC CGTCCTAAGT GGTCGTCGAC AGTTGATGGA ACACCTGCGC
GCCAGTGCCG GTTTCGTCCT GCGTCACAAC GGCCAGCAGA CCTTGCTGCA AGCGTTGCAG
CAGGATGTCC TGCGCCGCGC CCGTCACCGT CATCCCGGTT TCGACCAACT GAACGTCGCC
GAACAATGGC TGGTGCTGTC GCGCCTGACC CGCCAACCGA CCCGTGCCAT CAGCCAGGCC
CTGAGCCCGG CACCGAAGCG GCGTATGTCC AGCGCCGAAT TCTGCCGTCA GGTCGCCCAC
CTGCAAGCCT TGAGGAACAC GCTATGA
 
Protein sequence
MNRRALWLLG GALIVALLAV LGIYLYLKAT PYQTEVDHGP SPAAQANPYL AAEMFLRERG 
IDVSHAESLA VLPEIDPRQH TLLMFNDRSK MTPRQVDQVL NWARAGGRLV FVAESIWDEK
TGQSNDLLLD RVQLRQSFSK DLKDPPPDAA EDPFPNLTKL YLEDEDAPAY AGFDTAFHLD
DPKNLAQAWA NSAKATHMMQ LAFGLGTITV VTDADLWKTP AIAQHDNAWL LWYLSADTAV
TLLYNTEHDG LLTLLWRYFP QAIVALLALI GLWLWHVGVR HGPVQAPVLS GRRQLMEHLR
ASAGFVLRHN GQQTLLQALQ QDVLRRARHR HPGFDQLNVA EQWLVLSRLT RQPTRAISQA
LSPAPKRRMS SAEFCRQVAH LQALRNTL