Gene Pmen_3319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3319 
Symbol 
ID5105792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3662140 
End bp3663321 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content67% 
IMG OID640504576 
Producthypothetical protein 
Protein accessionYP_001188804 
Protein GI146308339 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCGGC GCGCCGGATT CATCCTCAGC CTGCTCCTGC TGCTGATGCT GGGCCTGCTC 
GCCAGCTACC TGCTGGGCAA GCTGGAGCCC TATGAAGATG TGGTCGAGCA CGGCCCCGCC
CCCGAGGTCG CCAGCAGCCC CTATCTGGCC GCCGAACATT TTTTGCGCAA GCAGGGCCTC
AAGGCCCAGC GCGCCGAGGG CCTCGAGGTG CTGGACGGCC TGCCCAGCCA GGGCCAGACC
CTGATGCTGC TGGCCGATCG CAGCAAGATG ACGCCGCGCC AGGTAGAGCG CGTCCTGCAA
TGGACGGCCA ATGGCGGCCA TCTGCTGTTC ATCGCCGAGC GCCTGTGGGA TGAGGAAGAG
GGCAAGAGCG GCGACCTGCT GCTCGATCTG CTCGGCATCC AGCAGTACAT GAGCGACGAG
CTGGATGAGG AGGATGGCGG CGAAACGGAG GAAGGACATG AAGAAGGCGA GGCCTATCCC
CAGCTGACCA AGCTCTACCT GGAAAACGAG GACGCGCCCG CCTATATCGC CTTCGATACC
GACTTCCACC TGTTCGACTC GCAGAACCGC GCCCATGCCT GGGCCAACAG CGATGCCGCC
ACCCACCTGC TGCAGCTGTA CCATGGCGAC GGCCTGATCA CCGTGCTCAG CGACCCGTGG
ATCTGGCAGA ACCGCAACAT CAATGAATAC GACCACGCCT GGCTGCTCTG GTATCTCGGC
CAGGACAGTG CCGTCACCCT GCTCTACCAC GCCGAACGCG ACGCCCTGGC CAGCCTGCTG
CTGCGCCATT TCCCACTGGC GCTGGTGCTG CTGGCCCTGT TGCTCGTCGC CCTGCTCTGG
CACGTCGGCA TGCGCCACGG CCCGTTGCAG GCACCGGCCA GCCGCGCGCG CCGGCAACTG
GAAGAACACC TGCGCGGCAG CGCCGACTTC CTGCTGCGCC GCAGCGGTCA GCACAGCCTG
CTCAAAGGCT TGCAACAGGA CATCGCCCGC CGCGCGCGGC GCCGCTATCC CGGCTTCGAG
AAGCTCGCGG TGGCCGAACA GTGGCAGGTG CTCGGCCGCC TCACCCGTCT TCCCGCCAAG
GACATCAGCC AGGCCATGCG CCCACTGCCG CCGCAGCGCC TATCCGCCAG CGACTTCACC
CGCCAGGTCG CCCACCTGCA AACCCTCAGG AACGCCCTAT GA
 
Protein sequence
MSRRAGFILS LLLLLMLGLL ASYLLGKLEP YEDVVEHGPA PEVASSPYLA AEHFLRKQGL 
KAQRAEGLEV LDGLPSQGQT LMLLADRSKM TPRQVERVLQ WTANGGHLLF IAERLWDEEE
GKSGDLLLDL LGIQQYMSDE LDEEDGGETE EGHEEGEAYP QLTKLYLENE DAPAYIAFDT
DFHLFDSQNR AHAWANSDAA THLLQLYHGD GLITVLSDPW IWQNRNINEY DHAWLLWYLG
QDSAVTLLYH AERDALASLL LRHFPLALVL LALLLVALLW HVGMRHGPLQ APASRARRQL
EEHLRGSADF LLRRSGQHSL LKGLQQDIAR RARRRYPGFE KLAVAEQWQV LGRLTRLPAK
DISQAMRPLP PQRLSASDFT RQVAHLQTLR NAL