Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_4320 |
Symbol | |
ID | 1186001 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 4871262 |
End bp | 4872482 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637395662 |
Product | hypothetical protein |
Protein accession | NP_794076 |
Protein GI | 28871457 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.692532 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCAGC GTCTCGCACT AATGGTCTGG CTACTGCTGG CCCTGTCGTT GCTGACCGGC GCGGGGCTTT ATCTGGGCCG AAATCTGGAG CGTTATGAGA AGACGGTCGA CGAGGGTCCT TCTCCAGAGG CGAGAGCCAA GCCCTGGCTG GCGGCTGAAC ACTTCCTGCG CGGCCGTTCG GTGGAGGTGA CTACCACTGA CACACTGGCA CAACTGCCCG ATCCTAATCA GCGAACACAG ACCCTGCTGC TGTTCAACGA CCGGGCAGGC ATGACGCCCG CGCAAACCGA GCAACTGCTG AACTGGGTCA TATCAGGCGG GCACCTGCTG TTTGTCGCCG AACAACTCTG GGACGAGCAA AAGGGCCGCA GTGGCGATCT TCTGCTCGAC AGGCTGCAGA TTCGTCAATA CCTCAGCAAA GACATCAATG CACAGGATCA ACAGCTGAGC GACGCACAGC CCATGCTGCC CATCCCGCTG ATGACGCCCG TGCCCAAACG CAAAAAGACG CCCTGGCCGG AATTGACCCG TCTGTACCTT GAAAACGAAC GCGCCCCGGC CTACATGAGT TTCGACCCGG CGTTTCACCT GGAAGACCCG CAGGATCACG CGCAGTCCTG GGCCAACAGC GCCGACGCCA CGCACTTGTT GCAGATCAGC CGTGGCAAAG GGCTGATCAC GGTTGTGACT GACGCCGACC TGTGGAAAAC CCACTCCATT GGCGAACATG ACAATGCCTG GCTGCTCTGG TATCTGACTC AGGACAGCAA AGTGACCATG GTGCTGGAAA CCGATCACGA CACCTTGCTG ACCCTGCTGC TGCGCAATTT CCCTCAGGCG CTGCTGGCAC TGGCCTTGCT GATTGGCCTG GGCCTGTGGC ATGTCGCCCT GCGCGAAGGC CCGCTACGCA AGCCAGCGTC ACTCGCACGC CGCCAACTGA CCGAGCACCT GAGGGCCAGC GCCGAATTCC TGCGCAGGCG CAGCGGCCAG CAAACACTGC TCAAGAGCCT GCAGCAGGAC ATCCTGCGCC GCGCCCGCCA GTTGCATCCG GGTTTCGAGC GGCTGGTGAT CGCCGAACAA TGGCAGGTGC TTTCGCGTCT CACCCGCTTG CCCACCAGCG CCATCAGCGA CGCCCTGCGC CCTCGCCCGC CTCAGCGCCT TTCACACAGT GAATTCACCC GTCAGGTGGC ACAATTGCAA ACCCTCAGGA ATGCCCTATG A
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Protein sequence | MSQRLALMVW LLLALSLLTG AGLYLGRNLE RYEKTVDEGP SPEARAKPWL AAEHFLRGRS VEVTTTDTLA QLPDPNQRTQ TLLLFNDRAG MTPAQTEQLL NWVISGGHLL FVAEQLWDEQ KGRSGDLLLD RLQIRQYLSK DINAQDQQLS DAQPMLPIPL MTPVPKRKKT PWPELTRLYL ENERAPAYMS FDPAFHLEDP QDHAQSWANS ADATHLLQIS RGKGLITVVT DADLWKTHSI GEHDNAWLLW YLTQDSKVTM VLETDHDTLL TLLLRNFPQA LLALALLIGL GLWHVALREG PLRKPASLAR RQLTEHLRAS AEFLRRRSGQ QTLLKSLQQD ILRRARQLHP GFERLVIAEQ WQVLSRLTRL PTSAISDALR PRPPQRLSHS EFTRQVAQLQ TLRNAL
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