6 homologs were found in PanDaTox collection
for query gene SO_3268 on replicon NC_004347
Organism: Shewanella oneidensis MR-1



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_004347  SO_3268  alpha amylase domain-containing protein  100 
 
 
638 aa  1334    Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009052  Sbal_2964  glycoside hydrolase family protein  69.83 
 
 
640 aa  941    Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_1400  glycoside hydrolase family 57  69.59 
 
 
633 aa  915    Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_007498  Pcar_1116  alpha amylase domain-containing protein  38.72 
 
 
654 aa  454  1.0000000000000001e-126  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_0448  glycoside hydrolase family protein  40.25 
 
 
659 aa  446  1.0000000000000001e-124  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_007519  Dde_0415  alpha amylase domain-containing protein  35.17 
 
 
663 aa  369  1e-100  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>