| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3268 |
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| Symbol | |
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| ID | 1170961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 3405080 |
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| End bp | 3406996 |
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| Gene Length | 1917 bp |
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| Protein Length | 638 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637345084 |
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| Product | alpha amylase domain-containing protein |
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| Protein accession | NP_718822 |
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| Protein GI | 24374779 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAGAGG TTCAATCCGT CGCACTATAT ACAGTGTTCC ATTTAAACTT GGCCTTTTCC
TCCATTGAAA ATGAACAACA TGGCGAAGTC ATTCGCAAAT GCTACTGGCC ACTCCTACAG
ATAGCGCAAA AAGGTATCCC TGTCGGAATT GAAATGACGG CCTATACCTT AGAAGCAGTT
CAACAGGTTG ACCCTCTGTG GGTAGAGGAA TTCAAACTAT TGCTCCAAAA AGGGATGTGC
GAACTTATCG CCAGTGGTGA TAGCCAAATT ATTGGGCCTT TGGTTCCTGC GAAAGTCAAT
CAGGCTAACC TCCGACTCGG TCAGGATACC TATCACACCT TGCTTGGAGT GCGTCCTCAA
ATTGCCTATA TCAATGAACA GGCCGTTTCA GCAGGGCTCT TAGATGTTTA TATCGACCAA
GGTTTTGAAG CTGTAGTGGT GGAATGGGAT AATCCCTACT CCCATAATCC AAACTGGTCC
AACACACTGT TAGACAGGCC ACAGAGTTTA CAAGCCGCAA GTGGTAGAAC AATTAAGGTG
ATTTGGAACC ACGCAATCGC TTTTCAAAAG TTCCAGCGTT ATGTTCATGG CGAATTAACG
CTAGAAGATT ATCTGCATTA TCTCGTTAAA ATATTCAAAC CTGGCATGTT GGCCTTTCCT
GTTTATGGCA GTGATGCCGA AGTGTTCGAC TTTCGTCCCG GTCGCTATCA AACTGAGGCG
GATCACGTTG AAGGGGAATG GCAGCGAATT TCCACCCTTT TTAACACTCT TGCTGAGATG
AATAACTATT GTTGGCAGTT GCCTCAACAC ATTCTTAAGT TTTGGCAAGG ATCAAATGCG
GTGGAAATCA CCAATGCAGA GCATCCGGTT TCAGTCAAAA AACAAGCTAA ATATAATGTT
AGCCGCTGGG GATTAAGTGG TCGTAATGAC CTCCTACTCA ACAGTCAATG CTATCAACGA
TTCGCCACAC TCGCACATAA TCCACATGCA ACAGAGCAAG ACTGGCGAAA CTTGTGCCGC
ATGTGGGCAA GCGATCTGCG AACCCATCTC ACCGCTAAAC GCTATCAGCA ACTTAACTTG
GTTGCTAATC CTGCTAATGC GCCAGTATTT GCGCCTTGGG AAGCACAACA AGATATTCAG
ATTGAGTACG ATACACAAAG ACGTCGTTTG CATATTCGTA CCCCTAAGGT ACACCTGAGC
CTAAATGGTA ACCGTGGATT GGCTATTGAT AAATTAGCCT TTAAGTCCCA CGACTTTGAA
CCCGTCCTTG GTACCTTATC CCATGGTTAC TTCGACCATA TTAGTTATGG TGCTGATTTC
TACTCGAATC ATTTGTTGAT GGAACGATTT CGTGCACGTG ATCGTGTCAC CGATCTCAAT
CGAGTGAATT ATGAATTGGG CTGCGCAGAG GGCAATTTAG TGATTTATTG CCGTCAATCA
TTAAAAAGTG GCGCAATCAT TAAATGGTAC CGTATCGAGC ATGAATCTTT ACATACAGGC
TTTTTCTTTG AGGACAAGCA GCGCCCTGAA GCCTCAATCC GACTCAGTTA TCTGACTTTA
CTCGGCTGTG ATAATAGAGC CTGGTACCAG ACCAATCTCG GTGGTGTTCA GGAAGAGTTC
TTTCAAATAC AAGAGGATAT GGACCAAGGT TCTCCTGTTT CTTCAATTGT TTCCGCAAAT
AGCGCCATTG GTGCTACTGC TGGCCAGATT CAGTTTGGCA GCGGCCAATG TGGCGTGCGA
TTAACTTGGG ATCCCGCAAA TTGTGCTGCA CTCCCCATGA TTTCGAGTAA AAAAATAGAT
GATAAATACC TTAATCGATT ATGGTTTTCG TTAGCCGAAG CCGATGAGAC ACTCAAGGAA
GGTGGCAATT TACTCGATTT CAATCTCTGT ATTACCCCTG AGAGTATTAA TCTATGA
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| Protein sequence | MPEVQSVALY TVFHLNLAFS SIENEQHGEV IRKCYWPLLQ IAQKGIPVGI EMTAYTLEAV
QQVDPLWVEE FKLLLQKGMC ELIASGDSQI IGPLVPAKVN QANLRLGQDT YHTLLGVRPQ
IAYINEQAVS AGLLDVYIDQ GFEAVVVEWD NPYSHNPNWS NTLLDRPQSL QAASGRTIKV
IWNHAIAFQK FQRYVHGELT LEDYLHYLVK IFKPGMLAFP VYGSDAEVFD FRPGRYQTEA
DHVEGEWQRI STLFNTLAEM NNYCWQLPQH ILKFWQGSNA VEITNAEHPV SVKKQAKYNV
SRWGLSGRND LLLNSQCYQR FATLAHNPHA TEQDWRNLCR MWASDLRTHL TAKRYQQLNL
VANPANAPVF APWEAQQDIQ IEYDTQRRRL HIRTPKVHLS LNGNRGLAID KLAFKSHDFE
PVLGTLSHGY FDHISYGADF YSNHLLMERF RARDRVTDLN RVNYELGCAE GNLVIYCRQS
LKSGAIIKWY RIEHESLHTG FFFEDKQRPE ASIRLSYLTL LGCDNRAWYQ TNLGGVQEEF
FQIQEDMDQG SPVSSIVSAN SAIGATAGQI QFGSGQCGVR LTWDPANCAA LPMISSKKID
DKYLNRLWFS LAEADETLKE GGNLLDFNLC ITPESINL
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