17 homologs were found in PanDaTox collection
for query gene SO_2674 on replicon NC_004347
Organism: Shewanella oneidensis MR-1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_004347  SO_2674  C4-type zinc finger DksA/TraR family protein  100 
 
 		 71 aa  145  2.0000000000000003e-34  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009457  VC0395_A0768  hypothetical protein  48.65 
 
 		 76 aa  61.6  0.000000004  Vibrio cholerae O395  Bacteria  normal  0.610234  n/a   
 
 
-
 
NC_009457  VC0395_A0669  hypothetical protein  48.65 
 
 		 76 aa  61.6  0.000000004  Vibrio cholerae O395  Bacteria  normal  0.153904  n/a   
 
 
-
 
NC_011004  Rpal_0666  transcriptional regulator, TraR/DksA family  38.03 
 
 		 73 aa  48.9  0.00002  Rhodopseudomonas palustris TIE-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008751  Dvul_0951  TraR/DksA family transcriptional regulator  35.71 
 
 		 73 aa  42.4  0.002  Desulfovibrio vulgaris DP4  Bacteria  normal  0.748618  normal  0.388424 
 
 
-
 
NC_011989  Avi_3012  hypothetical protein  51.22 
 
 		 103 aa  41.6  0.003  Agrobacterium vitis S4  Bacteria  normal  0.0800466  n/a   
 
 
-
 
NC_011769  DvMF_3183  transcriptional regulator, TraR/DksA family  39.71 
 
 		 74 aa  42  0.003  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.775887 
 
 
-
 
NC_007948  Bpro_3778  TraR/DksA family transcriptional regulator  39.47 
 
 		 79 aa  41.2  0.005  Polaromonas sp. JS666  Bacteria  normal  0.563726  normal  1 
 
 
-
 
NC_009727  CBUD_2068  DnaK suppressor protein  37.33 
 
 		 149 aa  40.8  0.006  Coxiella burnetii Dugway 5J108-111  Bacteria  decreased coverage  0.0000191774  n/a   
 
 
-
 
NC_011989  Avi_3053  DnaK suppressor protein  37.68 
 
 		 72 aa  40.8  0.007  Agrobacterium vitis S4  Bacteria  normal  1  n/a   
 
 
-
 
NC_009078  BURPS1106A_A3077  C4-type zinc finger DksA/TraR family protein  48.72 
 
 		 131 aa  40.4  0.009  Burkholderia pseudomallei 1106a  Bacteria  normal  1  n/a   
 
 
-
 
NC_009079  BMA10247_A2314  C4-type zinc finger DksA/TraR family protein  56.25 
 
 		 105 aa  40.4  0.009  Burkholderia mallei NCTC 10247  Bacteria  normal  1  n/a   
 
 
-
 
NC_009075  BURPS668_A3205  C4-type zinc finger DksA/TraR family protein  48.72 
 
 		 131 aa  40.4  0.009  Burkholderia pseudomallei 668  Bacteria  normal  1  n/a   
 
 
-
 
NC_008835  BMA10229_1334  C4-type zinc finger DksA/TraR family protein  48.72 
 
 		 131 aa  40.4  0.009  Burkholderia mallei NCTC 10229  Bacteria  normal  1  n/a   
 
 
-
 
NC_008784  BMASAVP1_1047  C4-type zinc finger DksA/TraR family protein  48.72 
 
 		 117 aa  40.4  0.009  Burkholderia mallei SAVP1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1419  C4-type zinc finger DksA/TraR family protein  48.72 
 
 		 131 aa  40.4  0.009  Burkholderia pseudomallei 1710b  Bacteria  normal  0.597542  n/a   
 
 
-
 
NC_006349  BMAA2024  C4-type zinc finger DksA/TraR family protein  48.72 
 
 		 131 aa  40.4  0.009  Burkholderia mallei ATCC 23344  Bacteria  normal  0.812974  n/a   
 
 
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