20 homologs were found in PanDaTox collection
for query gene Rsph17029_3927 on replicon NC_009050
Organism: Rhodobacter sphaeroides ATCC 17029



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009050  Rsph17029_3927  positive regulator of sigma E, RseC/MucC  100 
 
 		 161 aa  288  3e-77  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.20175  normal  1 
 
 
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NC_007494  RSP_3188  ApbE family protein  97.54 
 
 		 524 aa  157  5e-38  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  1  n/a   
 
 
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NC_009429  Rsph17025_3188  ferredoxin  57.96 
 
 		 164 aa  116  9.999999999999999e-26  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  1  normal  0.888796 
 
 
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NC_003910  CPS_4126  sigma-E factor regulatory protein RseC  28.85 
 
 		 159 aa  46.6  0.0001  Colwellia psychrerythraea 34H  Bacteria  normal  1  n/a   
 
 
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CP001637  EcDH1_1098  positive regulator of sigma E, RseC/MucC  30.91 
 
 		 159 aa  45.4  0.0004  Escherichia coli DH1  Bacteria  decreased coverage  0.00219404  n/a   
 
 
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NC_012892  B21_02428  hypothetical protein  30.91 
 
 		 159 aa  45.1  0.0004  Escherichia coli BL21  Bacteria  normal  1  n/a   
 
 
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NC_011353  ECH74115_3807  SoxR reducing system protein RseC  30.91 
 
 		 159 aa  45.1  0.0004  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.0524065  normal  1 
 
 
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NC_010658  SbBS512_E2935  SoxR reducing system protein RseC  30.91 
 
 		 159 aa  45.1  0.0004  Shigella boydii CDC 3083-94  Bacteria  normal  0.151183  n/a   
 
 
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NC_010468  EcolC_1107  SoxR reducing system protein RseC  30.91 
 
 		 159 aa  45.4  0.0004  Escherichia coli ATCC 8739  Bacteria  normal  0.288168  normal  1 
 
 
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NC_009801  EcE24377A_2856  SoxR reducing system protein RseC  30.91 
 
 		 159 aa  45.1  0.0004  Escherichia coli E24377A  Bacteria  normal  0.0186933  n/a   
 
 
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NC_009800  EcHS_A2725  SoxR reducing system protein RseC  30.91 
 
 		 159 aa  45.4  0.0004  Escherichia coli HS  Bacteria  normal  0.334856  n/a   
 
 
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CP001509  ECD_02464  RseC protein involved in reduction of the SoxR iron-sulfur cluster  30.91 
 
 		 159 aa  45.1  0.0004  Escherichia coli BL21(DE3)  Bacteria  normal  1  n/a   
 
 
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NC_010498  EcSMS35_2723  SoxR reducing system protein RseC  30 
 
 		 159 aa  44.7  0.0005  Escherichia coli SMS-3-5  Bacteria  normal  0.149775  normal  1 
 
 
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NC_013421  Pecwa_1201  SoxR reducing system protein RseC  27.2 
 
 		 150 aa  44.3  0.0007  Pectobacterium wasabiae WPP163  Bacteria  hitchhiker  0.0000162902  n/a   
 
 
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NC_010159  YpAngola_A3607  SoxR reducing system protein RseC  28.03 
 
 		 151 aa  43.9  0.001  Yersinia pestis Angola  Bacteria  hitchhiker  0.00898672  normal  1 
 
 
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NC_010465  YPK_1185  SoxR reducing system protein RseC  28.03 
 
 		 151 aa  43.9  0.001  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.101352  n/a   
 
 
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NC_009708  YpsIP31758_1132  SoxR reducing system protein RseC  28.03 
 
 		 151 aa  43.9  0.001  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.0219505  n/a   
 
 
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NC_009943  Dole_2512  positive regulator of sigma E, RseC/MucC  28.57 
 
 		 152 aa  41.2  0.007  Desulfococcus oleovorans Hxd3  Bacteria  normal  1  n/a   
 
 
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NC_009436  Ent638_3057  SoxR reducing system protein RseC  27.88 
 
 		 158 aa  40.4  0.01  Enterobacter sp. 638  Bacteria  normal  0.0908162  hitchhiker  0.000179243 
 
 
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NC_007912  Sde_2248  positive regulator for alginate biosynthesis MucC  26.92 
 
 		 156 aa  40.4  0.01  Saccharophagus degradans 2-40  Bacteria  hitchhiker  0.00000124681  normal  0.0231164 
 
 
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