9 homologs were found in PanDaTox collection
for query gene Rsph17025_3188 on replicon NC_009429
Organism: Rhodobacter sphaeroides ATCC 17025



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009429  Rsph17025_3188  ferredoxin  100 
 
 		 164 aa  309  1e-83  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  1  normal  0.888796 
 
 
-
 
NC_009050  Rsph17029_3927  positive regulator of sigma E, RseC/MucC  57.32 
 
 		 161 aa  99.4  2e-20  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.20175  normal  1 
 
 
-
 
NC_007494  RSP_3188  ApbE family protein  57.72 
 
 		 524 aa  79.3  0.00000000000002  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  1  n/a   
 
 
-
 
NC_003910  CPS_4126  sigma-E factor regulatory protein RseC  27.88 
 
 		 159 aa  48.5  0.00004  Colwellia psychrerythraea 34H  Bacteria  normal  1  n/a   
 
 
-
 
NC_007912  Sde_2248  positive regulator for alginate biosynthesis MucC  31.78 
 
 		 156 aa  44.3  0.0007  Saccharophagus degradans 2-40  Bacteria  hitchhiker  0.00000124681  normal  0.0231164 
 
 
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NC_011138  MADE_03001  sigma-E factor regulatory protein RseC  28.18 
 
 		 148 aa  42.7  0.002  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.0118803  n/a   
 
 
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NC_008740  Maqu_2260  positive regulator of sigma E, RseC/MucC  31.52 
 
 		 149 aa  42  0.003  Marinobacter aquaeolei VT8  Bacteria  normal  0.32117  n/a   
 
 
-
 
NC_009654  Mmwyl1_1101  positive regulator of sigma E, RseC/MucC  26.88 
 
 		 155 aa  40.8  0.007  Marinomonas sp. MWYL1  Bacteria  normal  1  normal  0.138854 
 
 
-
 
NC_008309  HS_1608  positive sigma-E factor regulatory protein  26.61 
 
 		 167 aa  40.8  0.008  Haemophilus somnus 129PT  Bacteria  normal  0.0389331  n/a   
 
 
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