Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_3188 |
Symbol | |
ID | 3721480 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007494 |
Strand | - |
Start bp | 242304 |
End bp | 243878 |
Gene Length | 1575 bp |
Protein Length | 524 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 640072865 |
Product | ApbE family protein |
Protein accession | YP_354705 |
Protein GI | 77465202 |
COG category | [H] Coenzyme transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis [COG3086] Positive regulator of sigma E activity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGGGCG CCGGCACCCC GGCCGATCCG CGCCTGCTGC GCGAACGGCT GAGGGTGGTC GCCGCACCTG CCGGGCGCTT GCGGCTCACG GCCCCGCGCG CCGCGGGCTG CGCCGGCTGC GGCGCGCGCG CGGCCTGCGG CGGGGCGGCG GCCTCCGGCC CCGCCCGGCT GCTCGAGATC GCCTGCCCGC CGGACCTCGC GCCCCGGCCC GGCGATGAGG TCGAAGTCGC TCTGTCCGGC GGGCGCTTCC TCGCGGCGGT GGGGCTGGCC TATCTGCTGC CCACGCTGGC GGTCGTGATC GCGGCCGGCG CGGGGCTGGC GCTGCAGCTG TCCGATCTGG GCGTGGCGCT CCTGCTGCCT GCCCGCCCTT GCGCTCTCGC TCATCCCCCT TGCCCTCGCC GGCCGGGGCG AGGGGCTGAC AGAGGCGCTC CGCGTCGAGG CCCTCCACCC CGCCGGGCCT TCCGAACCCG ACCCATGCGG ACCGTGACCC TCCCGCGCCG GGCCTTCCTT GCTACCCTCG CCGCGCTCGC GCTCGGCGGG GTGGCGGCCC TGCGCCTCGA GCCCGCCTCG GACGTTCGCG AGACCTTCTA TCTCTTCGGC ACGCTGGTAG AGATCGAGAC CCACGGCGTG CCCGAACGCA TGGCCCGCGC CGCCATCGCC CGCGCGGGCC AGAGCCTTGA GGCCGCGCAT CGCGACTGGC ACGGCTGGCG GCCGGGCGAA CTCGGGACCT TGAACACGGC CATCGCGGCG GGGCGCCCGC AGCGCGTGGA TGCGACCCTC GCGGCCCTCC TGCGCAAGGG GCGCGCCCTC TCCTGTGCGA GCGGCGGGCT GTTCGATCCG GCCATCGGCA GGCTGGTCGG CGCCTGGGGC TTTCACGCCG ACACATTGCC CGAGGGCGAT CCGCCATCCG CCGCCGCCAT CGCGGCCCTC GTCGCGCGCC ACCCGCGCAT GACCGACCTG CGCTTCGACG GCACCGAGGT GCGCTCGCTC AATCCCGCGG TTCAACTCGA TCTCGGGGCC TATGCCAAGG GGGCGGCGCT CGAGATGGCG GCGGCCGAGC TTCGGGCGGC AGGCGTCGAG GATGCGGTGC TGAACGCCGG CGGCGGTGTG CAGGTCATGG GCCGCCACGG CGCGCGGCCC TGGCGGGTGG CGATCCGCGA TCCGTTCCAG TGGGGCGTGG TGGCGGGCGT TTCGCTCCGC CCCGGCGAGG CCCTGCATAC GTCGGGCAAT TACGAGCGCT ATTTCGACCG CGGCGGTGTG CGCTTCTCGC ACATCCTCGA TCCGCGGACG GGCCGTCCGA TGCAGGGCAT CGTCTCGGTC TCGGTGCTCG ACACCGACGG CGCGCGGGCC GATGCCGCGG CCACCGCGCT CTGCATCGCG GGCCGCGAGG CCTGGCCGCG GGTCGCGGCG GCGATGGGCG TGCGCGCCGT CCTGATGATC GCGGACGATG GCGCGGTCTT CGCCACGCCC GAGATGATGG CGCGGCTCGA ACCGGCGCAG GGCGGCTACC CCGCCCCGGT GCAGATCGTA TCGCTGCCGG AGGATGTCAC ACCGCCCGCC TGTCCCGAGG ACTGA
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Protein sequence | MAGAGTPADP RLLRERLRVV AAPAGRLRLT APRAAGCAGC GARAACGGAA ASGPARLLEI ACPPDLAPRP GDEVEVALSG GRFLAAVGLA YLLPTLAVVI AAGAGLALQL SDLGVALLLP ARPCALAHPP CPRRPGRGAD RGAPRRGPPP RRAFRTRPMR TVTLPRRAFL ATLAALALGG VAALRLEPAS DVRETFYLFG TLVEIETHGV PERMARAAIA RAGQSLEAAH RDWHGWRPGE LGTLNTAIAA GRPQRVDATL AALLRKGRAL SCASGGLFDP AIGRLVGAWG FHADTLPEGD PPSAAAIAAL VARHPRMTDL RFDGTEVRSL NPAVQLDLGA YAKGAALEMA AAELRAAGVE DAVLNAGGGV QVMGRHGARP WRVAIRDPFQ WGVVAGVSLR PGEALHTSGN YERYFDRGGV RFSHILDPRT GRPMQGIVSV SVLDTDGARA DAAATALCIA GREAWPRVAA AMGVRAVLMI ADDGAVFATP EMMARLEPAQ GGYPAPVQIV SLPEDVTPPA CPED
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