11 homologs were found in PanDaTox collection
for query gene Rru_A0173 on replicon NC_007643
Organism: Rhodospirillum rubrum ATCC 11170



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007643  Rru_A0173  CRISPR-associated Cse2 family protein  100 
 
 
200 aa  399  9.999999999999999e-111  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.604999  n/a   
 
 
-
 
NC_011832  Mpal_1606  CRISPR-associated protein, Cse2 family  31.64 
 
 
178 aa  62.8  0.000000003  Methanosphaerula palustris E1-9c  Archaea  normal  normal  0.823422 
 
 
-
 
NC_011365  Gdia_0426  CRISPR-associated protein, Cse2 family  30.26 
 
 
196 aa  58.5  0.00000006  Gluconacetobacter diazotrophicus PAl 5  Bacteria  hitchhiker  0.00624745  normal  0.0771696 
 
 
-
 
NC_007796  Mhun_1379  hypothetical protein  23.98 
 
 
174 aa  55.1  0.0000007  Methanospirillum hungatei JF-1  Archaea  hitchhiker  0.00330561  normal  0.354679 
 
 
-
 
NC_007955  Mbur_0595  hypothetical protein  27.67 
 
 
143 aa  55.1  0.0000007  Methanococcoides burtonii DSM 6242  Archaea  decreased coverage  0.000000000000035066  n/a   
 
 
-
 
NC_009468  Acry_3316  hypothetical protein  28.99 
 
 
179 aa  52.4  0.000004  Acidiphilium cryptum JF-5  Bacteria  normal  0.531087  n/a   
 
 
-
 
NC_011894  Mnod_5413  CRISPR-associated protein, Cse2 family  38.55 
 
 
205 aa  48.5  0.00006  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009484  Acry_1812  hypothetical protein  37.04 
 
 
179 aa  46.6  0.0002  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_011149  SeAg_B3070  crispr-associated protein, Cse2 family  30.91 
 
 
182 aa  44.7  0.001  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011083  SeHA_C3136  Cse2 family CRISPR-associated protein  35.71 
 
 
186 aa  41.2  0.01  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.776659  normal 
 
 
-
 
NC_011205  SeD_A3253  crispr-associated protein, Cse2 family  36.99 
 
 
186 aa  41.2  0.01  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.872797  normal  0.58166 
 
 
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