Gene Rru_A0173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A0173 
Symbol 
ID3834151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand- 
Start bp203764 
End bp204366 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content67% 
IMG OID637824251 
ProductCRISPR-associated Cse2 family protein 
Protein accessionYP_425265 
Protein GI83591513 
COG category 
COG ID 
TIGRFAM ID[TIGR02548] CRISPR system CASCADE complex protein CasB/Cse2 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.604999 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCGGG CCAGTCCTCT CAACGAGACG TTTTCCGAAT GGTGGGAAAA ATCGATCGAC 
AAGGACGACG GTCAGGCCAA GGCCGATCGG GCGGCCCTTT GCCGGCTGGG GGTGGCCGAT 
CAGGTGTTCC CCCCCGCCAT CGATGTCGCC GGTGCGCTGA CCATCGGCGC CTTTCGCACC 
CTGTACCGCC AAATCAACCA GCGGGAGATC CTGAAGGATT TTCGCACGGG TGATTGGGAA 
GACCGATTGG CGGTCGCCGC CATGGTTTTG GCCCAGGTGC GCACCAACAC GCCGTCGCAC 
ACCACGGCGG CCCTGCTGGG TGGTGACGAC GATACCCCGC TGATGGCTGA AAGCCGGTTC 
CGTCGGCTGC TGCGCGCCAA GGATCCGGTT GACCTATGGG CTCAGGCGCG GCGCGCCGTC 
GCCCTGCTCA AACGCGAAGC CCCGGTGGGC GATTTGGGCG CAAGCCTGTT CACCTGGGAT 
GCCCATACCC GCCGCCGCTG GGCCGGCGCC TATTGGCGCC TTCAGGCCCC TGCCGAAGAC 
CAATCCGCCC CCTCCGCCGC CGTCCTCTCC CCAACTCCGC TGTCGACCTT AGGAGCCCCG 
TGA
 
Protein sequence
MNRASPLNET FSEWWEKSID KDDGQAKADR AALCRLGVAD QVFPPAIDVA GALTIGAFRT 
LYRQINQREI LKDFRTGDWE DRLAVAAMVL AQVRTNTPSH TTAALLGGDD DTPLMAESRF 
RRLLRAKDPV DLWAQARRAV ALLKREAPVG DLGASLFTWD AHTRRRWAGA YWRLQAPAED 
QSAPSAAVLS PTPLSTLGAP