9 homologs were found in PanDaTox collection
for query gene Rpic_4478 on replicon NC_010678
Organism: Ralstonia pickettii 12J



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_003296  RS01899  hemagglutinin-related transmembrane protein  81.02 
 
 		 580 aa  824    Ralstonia solanacearum GMI1000  Bacteria  normal  0.594262  normal  0.457865 
 
 
-
 
NC_010678  Rpic_4478  putative hemagglutinin-related transmembrane protein  100 
 
 		 567 aa  1140    Ralstonia pickettii 12J  Bacteria  normal  0.360251  normal  0.114137 
 
 
-
 
NC_012857  Rpic12D_4612  hemagglutinin-related transmembrane protein  100 
 
 		 567 aa  1140    Ralstonia pickettii 12D  Bacteria  normal  0.0275534  normal  1 
 
 
-
 
NC_010002  Daci_0215  putative hemagglutinin-related transmembrane protein  41.57 
 
 		 549 aa  394  1e-108  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007971  Rmet_6093  putative hemagglutinin-related transmembrane  43.17 
 
 		 595 aa  387  1e-106  Cupriavidus metallidurans CH34  Bacteria  unclonable  0.00000000000000425854  normal  0.476994 
 
 
-
 
NC_007348  Reut_B5120  hemagglutinin-related transmembrane protein  39.16 
 
 		 581 aa  361  2e-98  Ralstonia eutropha JMP134  Bacteria  normal  1  n/a   
 
 
-
 
NC_007973  Rmet_2057  hyicolysin  39.22 
 
 		 561 aa  357  2.9999999999999997e-97  Cupriavidus metallidurans CH34  Bacteria  normal  0.257748  normal  1 
 
 
-
 
NC_010623  Bphy_3826  putative hemagglutinin-related transmembrane protein  41.57 
 
 		 577 aa  352  8e-96  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.59529 
 
 
-
 
NC_007973  Rmet_0551  hyicolysin  38.6 
 
 		 577 aa  292  1e-77  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  0.176092 
 
 
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