| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0551 |
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| Symbol | |
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| ID | 4037340 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 587873 |
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| End bp | 589606 |
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| Gene Length | 1734 bp |
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| Protein Length | 577 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637975926 |
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| Product | hyicolysin |
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| Protein accession | YP_582706 |
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| Protein GI | 94309496 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.176092 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCAAA ACCTGGCACG CGCGTCCGCG TGCGTACGAC CCTTTCCGCG TGTTTCTGGC
TGGGCCGGGT TGGCAGCGAT GAGTGTGCTG GCGCTGGCAG CCTGTGGCGG CGGTGGCGAT
GGTGGGTCTG GCACCACCGC CACGCCCTCT ACCGCCACTA CCACCACCAC CACCACCACC
ACCACACCCC CCGCTGCGCC TGCGCCGTTG CTGGTCACCG GCCTTGACCC GTCGTGCAGC
GGCTGCGGCG CAGCCTCCGC CAGCAGCTAT GCGGGAGCCG GCACCGGTAT CTGGGGTCGC
GCTCCGGGTA GCAGTGACAT GGACGTCCAG TACGCCATCT CCGGCGTGGC CGGACGGTCA
ATCTCGCTGA TGCTGACCAA TCTGTCGAAC ACGCTGGTCG CCATGCCGGC CTCGGTCTCG
TCGAGTGTGG CGGCGGACAT GCTATCGCCC CAGGCGTTGA GCGCGGTCTC GGACGCCGAA
GCCACACAGC GCGCCATCGG CGAGTACAAC CGCGCGGGCT GGGTGGACAC CCTGCAGAAC
GGGCCGGAGC CACGGCTGAG CACAATGGGA GTGTCGGCGC CGCTATCCGC GACGGTCGGT
CTGGCTGTGG GGGCGCAGAA GAGCTGGTAT CACACTGACA AGACCACGCG TCCGGCCACG
TTGCGCACGC AGGTGACGGC CCCGGGCAAT GTGCGAGTCA ACTTCTGGGT CGAGGACGCC
GAGTTCACTG CCGGAAACAT CACGCAGGCG ATGGTCGACG GTCTGGCCGC CGCGTTCGCG
AACAGCGGTG GCATCTACGA CAAGCTCGTC AATATCGGCG GCCCGGTCTG GGGACCCAAC
AGCTACGGCG GCACCATGTT GCCCGACGGC CAGCCGCTGG ACATCGTCAT TCTCAATTTC
AACCGCGACG GCCAGCCGTT CGGTACGGTC GGCTACTTCT GGAGCATGCA CAACTTCCTG
AAGAGCAGCG CACAGAACAG CAACGAGGCG ATCTCGCTCT ACCTGGACAG CGAGACCCTG
TCTCTCGGCG GCGCGTCCGG TCTGCAATCG GTCAAGACGG TCATGGCGCA CGAAGGCACG
CACATGCAGA ACTTCTATCG CCGCCAGGTC AGCATGGGGG CTGCGTACGC CTACGATACC
TGGCTCGAGG AAATGACGGC GATGCAGATG GAGGACTTCC AGAGTCACGA TATCGATCCG
ACGTACAACC CCATCCGCGA TCTGCGCCTG CCGGACTTCT ATCGCTATGG CGCCTATAAC
TGCAACGTGC TGCAGTTCAC GGGATTTGGC GCGTCGTGCG AAAGCTATTC GGTGTCCGGC
AGCCTTGGAG GCTTCCTCAA TCGCCAGCTA GGCCTGGCGT TCTACAAGGA TCTGCTGACG
CGCGCCACGA CGGGTTCTAA GACCGTGCTC GATCAGGCGA TTCGCGCGGC ACAACCGGGC
TGGACGTTTG AACAGGCCCT GCTGAACTGG AAGGTGACCA CGACCGCTGC GCTGCCGGCT
GCGTCGGCGC CCGCCGGCTT TGGCTACCCG GGCCGGACGG ATGGCGTGTA TGTGCTGCCA
CAGATCGATC CGTCGCTGCC GGCGTATGCG GCGCTGCGAA AACTGCCGGC CATCGCCCCG
ATCTTCCTGC AGGGCTATGG CACTTACGCG GCTGCGCGTA GCGACAGCAA CGGCGTGTAC
AGCGACAAGG TGCGCGTGCC GGCGGGTGCG GCGCTGTCGG TCGTGGTGTA TTGA
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| Protein sequence | MRQNLARASA CVRPFPRVSG WAGLAAMSVL ALAACGGGGD GGSGTTATPS TATTTTTTTT
TTPPAAPAPL LVTGLDPSCS GCGAASASSY AGAGTGIWGR APGSSDMDVQ YAISGVAGRS
ISLMLTNLSN TLVAMPASVS SSVAADMLSP QALSAVSDAE ATQRAIGEYN RAGWVDTLQN
GPEPRLSTMG VSAPLSATVG LAVGAQKSWY HTDKTTRPAT LRTQVTAPGN VRVNFWVEDA
EFTAGNITQA MVDGLAAAFA NSGGIYDKLV NIGGPVWGPN SYGGTMLPDG QPLDIVILNF
NRDGQPFGTV GYFWSMHNFL KSSAQNSNEA ISLYLDSETL SLGGASGLQS VKTVMAHEGT
HMQNFYRRQV SMGAAYAYDT WLEEMTAMQM EDFQSHDIDP TYNPIRDLRL PDFYRYGAYN
CNVLQFTGFG ASCESYSVSG SLGGFLNRQL GLAFYKDLLT RATTGSKTVL DQAIRAAQPG
WTFEQALLNW KVTTTAALPA ASAPAGFGYP GRTDGVYVLP QIDPSLPAYA ALRKLPAIAP
IFLQGYGTYA AARSDSNGVY SDKVRVPAGA ALSVVVY
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