9 homologs were found in PanDaTox collection
for query gene Rmet_6093 on replicon NC_007971
Organism: Cupriavidus metallidurans CH34



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007971  Rmet_6093  putative hemagglutinin-related transmembrane  100 
 
 
595 aa  1226    Cupriavidus metallidurans CH34  Bacteria  unclonable  0.00000000000000425854  normal  0.476994 
 
 
-
 
NC_007973  Rmet_2057  hyicolysin  60.46 
 
 
561 aa  655    Cupriavidus metallidurans CH34  Bacteria  normal  0.257748  normal 
 
 
-
 
NC_007348  Reut_B5120  hemagglutinin-related transmembrane protein  53.6 
 
 
581 aa  566  1e-160  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010623  Bphy_3826  putative hemagglutinin-related transmembrane protein  46.85 
 
 
577 aa  476  1e-133  Burkholderia phymatum STM815  Bacteria  normal  normal  0.59529 
 
 
-
 
NC_007973  Rmet_0551  hyicolysin  45.42 
 
 
577 aa  375  1e-103  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.176092 
 
 
-
 
NC_010678  Rpic_4478  putative hemagglutinin-related transmembrane protein  43.79 
 
 
567 aa  376  1e-103  Ralstonia pickettii 12J  Bacteria  normal  0.360251  normal  0.114137 
 
 
-
 
NC_012857  Rpic12D_4612  hemagglutinin-related transmembrane protein  43.79 
 
 
567 aa  376  1e-103  Ralstonia pickettii 12D  Bacteria  normal  0.0275534  normal 
 
 
-
 
NC_003296  RS01899  hemagglutinin-related transmembrane protein  41.97 
 
 
580 aa  362  2e-98  Ralstonia solanacearum GMI1000  Bacteria  normal  0.594262  normal  0.457865 
 
 
-
 
NC_010002  Daci_0215  putative hemagglutinin-related transmembrane protein  40.42 
 
 
549 aa  338  1.9999999999999998e-91  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>