Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_6093 |
Symbol | |
ID | 4036491 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007971 |
Strand | + |
Start bp | 207697 |
End bp | 209484 |
Gene Length | 1788 bp |
Protein Length | 595 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | putative hemagglutinin-related transmembrane |
Protein accession | YP_581902 |
Protein GI | 94152495 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000000000425854 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.476994 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGGGAG TCCGTTATCA CATCTGCCAA ATTCAGCACA AATGGGAAAA GTCGATTCAT ATAACAACAG GAGAAGTCGT CGTTATGCGC ATTCAGCGAA CTTTGTCAAA CAAGAAGGGG GCTCTGGCAC TGGCCATGTT GGTCGCTGCC CTCGCAGGTT GTGGTGGCGG TGGTGATGGA GCGGAAACGC CCCAGGCCAC CCCGCAGTCT CCCAGCTCAC CGGTGACCGG CACACCGGAA GGCCCAACCA CGCCCGTCAC GCCGGCCAAG CCCACCAGCC TGGTGGCGCC GTCCTGCCTG AACTGTGGCG CGGTTGATTC GAATACGTAC TCCGGCACCG GCGTCGGGGT GTGGCAGGCA ACGAACGCCT CGTTGGCTGC CGCCGATGTG CCCGTGAGCA TTGATGGCCT TACCGGTCAG GATGTGACGC TTGTCTTCAC GAACGAGAGC GGCGTCGCGC AGCCCATGCC TGCCATTTCG CTGACTGCCT CCCGCTTCCC GTCGGTCGCA GCAAGCCAGC TGCGTTGGCA AGACCCCGCC ACCGATGCGA AGCAGCGCAT CGGCGAGTTC AACCGAAATG GCTGGGCCGC CCTTGCCGGT AGCCAAGGCA CCGCACCGCG ATACTCGATG TCCAGTGGGC CGAGCAAGTC CGTTGTGAAT GACACGCGCG ACTGGTTCAA CGAGGACAAT TCCGTCCGAT CGACCACCCT GGTTCGCCAG GCAACGACGA CCGACGGTGT CACGGTGAAC TTCTGGGTGG AGAACTCCGA GAATGCCCCG ACGAAAGTCA GTTCAGCAAT CATCGACCAG CTTGTCGACC GCTTCGCTTC GCCCGGCAAG GTCTACGACA TGCTGAAGGA TGTCGGCGGC CCGCTGTGGG GCTCTCACAG CTATATCAAT CTCATCCCAG GCACGGGCCA GCCGATCGAT ATCGTCATTC TGAACTTCGA TCGCAACAAC GCCCCGTACG GGATGACAGG CTACTTCTAT TCGCGAAATG CCATTGCGAA GAGTGCGTCG AATCCGTACA GCAATGAGTC GTTGTCGCTG TATCTGGACT CGGAAACCCT GTACCTCGAC GGCGCCACTG GTCTTACGGA AGTGGTCATG ACGATGGCGC ACGAAGGGAT GCACGCCCAA AATTTCTATC GCCGTGGCGT TCTGGGCGGC GTGGAGAGTA TGTTCGCGAC TTGGCTGGAA GAAGCCACGG CGATGATGAT GGAGGATTTC GCCAGCGCTA CGCTCGATCC CGGCCACAAT CCCATTCGAG ACGTTCGCTT CTATGACTAC GTCAAGTACA AGGGCGGAAG CTACAACTGC AGCTTGCTCG ACTGGACGCC GTTCAGCGCA TCGTGCGATA GCTACTCCGT ATCGGGATCG TTCGGCGGCT TCCTGAATCG CCAACTGGGC TTGCGCATGT TCAAGTCCCT GCTGGGGAAC ATGAGCTCGA CGAACTCGGT CGACGTGCTA GATACCGTCA TCAAGACGAA TTTCCCCGGC ACCAGTTTCG TGGGGCAGTT CCGCCGATTC TCGGCAACGG CGGGAGCGCT TATTCCAGCA GCGACGAGCC CCAAGGGCTT TGGTTTCCCG GCTCGCTCCG ACAACGGGTA CAACATTCCG GCCATCGATC CGACGGCCTA CGCGCCGTAC CGGACGCTGA CTCAGACGGT GCCCACCACG CTCCAGGCAT ATGCGAGCCT GCCCGTCGTG CGGCAAGCTG CGAAGGGTCG ATACACCGAG ACGGTTAAAG TACCGGCCGG CACGACTCTT TCCGTTGTGA TCCACTAA
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Protein sequence | MTGVRYHICQ IQHKWEKSIH ITTGEVVVMR IQRTLSNKKG ALALAMLVAA LAGCGGGGDG AETPQATPQS PSSPVTGTPE GPTTPVTPAK PTSLVAPSCL NCGAVDSNTY SGTGVGVWQA TNASLAAADV PVSIDGLTGQ DVTLVFTNES GVAQPMPAIS LTASRFPSVA ASQLRWQDPA TDAKQRIGEF NRNGWAALAG SQGTAPRYSM SSGPSKSVVN DTRDWFNEDN SVRSTTLVRQ ATTTDGVTVN FWVENSENAP TKVSSAIIDQ LVDRFASPGK VYDMLKDVGG PLWGSHSYIN LIPGTGQPID IVILNFDRNN APYGMTGYFY SRNAIAKSAS NPYSNESLSL YLDSETLYLD GATGLTEVVM TMAHEGMHAQ NFYRRGVLGG VESMFATWLE EATAMMMEDF ASATLDPGHN PIRDVRFYDY VKYKGGSYNC SLLDWTPFSA SCDSYSVSGS FGGFLNRQLG LRMFKSLLGN MSSTNSVDVL DTVIKTNFPG TSFVGQFRRF SATAGALIPA ATSPKGFGFP ARSDNGYNIP AIDPTAYAPY RTLTQTVPTT LQAYASLPVV RQAAKGRYTE TVKVPAGTTL SVVIH
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