| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS01899 |
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| Symbol | RSp0808 |
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| ID | 1223115 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 1018004 |
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| End bp | 1019746 |
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| Gene Length | 1743 bp |
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| Protein Length | 580 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637240668 |
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| Product | hemagglutinin-related transmembrane protein |
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| Protein accession | NP_522369 |
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| Protein GI | 17549029 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.594262 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.457865 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGGCA GTGAAAAGAT GACGTGCGTG GCGCAACCGC AGGACGTGAC CGGCACGAGA
CAAACGATTT GGACCGCCAC CATGATGGCG GTCGTAGCAG CAGCGGCCCT GACCGGCTGC
GGCGGAGGCG GTGGCGGCGG TTCCGACACC AGCAGCAGCG CCTCCACGAC ACAGGCCACC
CCGGCCAGCG TGGCGGTCGC GGCGGCTTGC AGCGGCACCC ATTGCGGTGC GCTCGGCACC
ACCTACGCCG GCTCCGGCGT GGGCATCTGG CAGGCGACCA ACACGGGCGG CGTGGCCGCC
GCGGTGCCGG TCTCGATCGC CGGCCTCACG GGCCAGAACG TCACCCTGAT CTACACCAAC
CAGAGCGCGG CCGCCCAGCC GATGCCGTCC GTTTCGCTCA GCACCGCCAG CCTGACCGGC
ACCGGCGGCA CGTCGGTCGC CAAGCCCCAG GCCAGCACCG GCATGCAGGG CGACTCCAAT
GCGGCGTTCG ACCGCACGCT CTCCGACTTC AACGCCCACG CCCTGGACGG CTACGCCAGC
GGCCCCGCTC CACTCAAGAC GCAGGGCGCC GCAAACGTTG CCGTGCTGCG TCCGCAATCG
GTCGCCGGCG TCGGCGCGCA GCGCTCGTGG AACCACCAAC AGCCGGACGG CGCCGCCGTG
ACCGTGACCG CTACGCTGCG CCAGCAGGCC ACCGCCACCG ACGGCCGCGT CGTCAACCTG
TGGGTCGAAG ACAGCGAATA CGGCAGCAGC AAGATCTCCG ACAGCATCAT CAACACGCTG
CTCACCAAGT TCAGCTCGGG CAGCCAGTCA GTCTACTCGC TGGCCACGTC GCTGGTCGGC
CAGCCGTGGG GCGCGTACTC CAGCTCGGCC AGCCTGATCG ACCCGAACCA GGCGCTCGAC
ATCGTCGTGC TGAACATCGA GCCGGACAGC CAGCCCTACG GCCGCGTGGG CTATTTCTGG
GCGCGCAACA ACTTCACCAC CAGCGCCCAG CCGCTGTCGA ACCAGTCGCT GTCGCTGTAC
GTGGATTCGG AGACGATCTA CCTGGGCGGC ACCAGCGGCC TGAGCACCGT CGTCTCGACC
CTGGGCCACG AGTTCACGCA TATGGCCAAC TTCTACCAGC GCGGCGTGCT GCACGGCTCG
TCCTACATGT ACGGCACGTG GCTGGAAGAA ATGACGGCAA TGACCATGGA AGATGCGCTG
TCCAGCCAGA TCGACGCGAG CTTCAACACT GTGCGTGACA GCCGCTTCCC GGCCTGGCTG
CAAAGCGCGT ACGACTGCTC GCTGACCGCG TTCAACTCGT CGCTGTCGTC GACCTGCCCC
GGGTATCCGA TCTCGGGCAG CCTGGGCGGC TTCCTGCTGC GCCAATACGG CCTGTCGTAC
TACCGCAACC TCCTGCAGAA CTTCTCGTCG ATCGATTCGG CCACCCTGCT GAACAGCGCC
ATCCAGGCAG GCGGCGGCGC CGGCCTGGGT GACGCCGTCG CCCGCTGGGG CACGGCCATC
GCGTTGCTGC CGGCCGCCTC CAGTCCGTCG GGCTTTGCCT ATCCGGCGCG CACCGAAGGC
AGCTTCTCGA TCCCGGCCGT CAACGGCCCC GACTACAGCG GCCAGCGCGC GATGCCGAGC
TCGGTGCCGG CCACGCTGCA GGGGTACGGC CATTTCCCGG TGGCACGCGG CGTCAAGATC
GGCACGTACA GCGAGACGAT CACCGTGCCG GCCTATTCGA CGGTGTCGAT CGTGGTGCAG
TAA
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| Protein sequence | MFGSEKMTCV AQPQDVTGTR QTIWTATMMA VVAAAALTGC GGGGGGGSDT SSSASTTQAT
PASVAVAAAC SGTHCGALGT TYAGSGVGIW QATNTGGVAA AVPVSIAGLT GQNVTLIYTN
QSAAAQPMPS VSLSTASLTG TGGTSVAKPQ ASTGMQGDSN AAFDRTLSDF NAHALDGYAS
GPAPLKTQGA ANVAVLRPQS VAGVGAQRSW NHQQPDGAAV TVTATLRQQA TATDGRVVNL
WVEDSEYGSS KISDSIINTL LTKFSSGSQS VYSLATSLVG QPWGAYSSSA SLIDPNQALD
IVVLNIEPDS QPYGRVGYFW ARNNFTTSAQ PLSNQSLSLY VDSETIYLGG TSGLSTVVST
LGHEFTHMAN FYQRGVLHGS SYMYGTWLEE MTAMTMEDAL SSQIDASFNT VRDSRFPAWL
QSAYDCSLTA FNSSLSSTCP GYPISGSLGG FLLRQYGLSY YRNLLQNFSS IDSATLLNSA
IQAGGGAGLG DAVARWGTAI ALLPAASSPS GFAYPARTEG SFSIPAVNGP DYSGQRAMPS
SVPATLQGYG HFPVARGVKI GTYSETITVP AYSTVSIVVQ
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