5 homologs were found in PanDaTox collection
for query gene Rpic_0278 on replicon NC_010682
Organism: Ralstonia pickettii 12J



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010682  Rpic_0278  hypothetical protein  100 
 
 
141 aa  284  2e-76  Ralstonia pickettii 12J  Bacteria  normal  0.981271  normal 
 
 
-
 
NC_012917  PC1_1598  integrase family protein  33.73 
 
 
396 aa  48.1  0.00004  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.527181  n/a   
 
 
-
 
NC_007520  Tcr_0328  Phage integrase  29.76 
 
 
394 aa  44.3  0.0006  Thiomicrospira crunogena XCL-2  Bacteria  normal  0.915662  n/a   
 
 
-
 
NC_010725  Mpop_3234  integrase family protein  28.18 
 
 
399 aa  43.5  0.0009  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_2951  integrase family protein  31.94 
 
 
407 aa  40.8  0.007  Dickeya dadantii Ech703  Bacteria  normal  0.165288  n/a   
 
 
-
 
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