| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1598 |
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| Symbol | |
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| ID | 8132539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 1850685 |
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| End bp | 1851875 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644864886 |
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| Product | integrase family protein |
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| Protein accession | YP_003017176 |
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| Protein GI | 253687986 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.527181 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCATA TTAAAATGAA TACATTTATG TTTAGTAATG GTGAGCGATA TTGCCATGTT
ATTAATAGCA GGACTGGAGA GCCACTTTTT GATCCTAATC TCTATATGAT GACGAACGTC
AGGAAAGAGT CTGTGTCGAT CAACTCGATG GAGGCTGTTG CCGGGAGTCT GGTGTTATTT
TATCGATTTT TGTATATGAG AGAAATAGAC ATCGTGGATC GGATCACCCG ACTGAAATTT
TTAAGCTCTC ATGAAATCGA TGCGCTGGCT GATTTCGCTT CGGAAAACTT CAAAAATAGA
AAAAAACTGT CCGGTAGTCG AGGAGTGAAA GAGCCGACAA AGTATTCCAG ACTGACATTC
ATTTGTCATT ATCTTGACTG GCTATGCCGG TATCACTTAC CACATTCGGT AGACGTAAAC
CTTGACGACA AGATCATGAG GATGGTGGTT GATCTGAAAA ATAAAAGGCC TAATTCTGAC
GGATATCGTG ACTATATCCC TGAAAAGTCC TTAACGAAGG CGCAGAGAGA TATTTTATTT
AAAGTTGTCA GTGTTGGGTC TGAATTGAAT CCATTTTCTC CTGAGGTTCA GGCACGGAAC
AGACTCATCA TTGTATTACT TTTCAGTTAT GGGATCAGAG CCGGTGAACT TTTAAATCTC
AGGATCAGTG ATATTAATTT TGCTTCTTCC TCTATCACTA TCCAACGCCG CGCCAATGAC
AAATCAGATC CAAGGGTTAA GCAGCCTCTT GTCAAAACGC GGGGAAGGGA GTTCACTTCT
GATGAAGAAG TTATGTCTGA ATTATATAAT TATATCCAGA ACGACAGGCG AAAAATAAAA
AATGCAAAGA AAAATGATTT TCTTTTTATT ACCTACAAGA AAGGGAATAC ACAGGGAAAA
CCCTTGTCGA TGTCGGCTTA CCGGAAAATC ATCAATACGA TTAGTCAATG CTCACCGGAA
TTATACGGGT TAACAGGACA TCAACTGAGA CATACATGGA ATGATAATTT TTCCTCCATG
TCAGACGCCC ATGATCTTTC TGAGGTAGGA GAAGGGCAAT GCAGAGGGTA TTTAATGGGC
TGGGTGCCGG GATCTGAGAT GGAGAAGATC TACAACAGAA GGCACATTAT TACAGAAGCC
AATAAAATTT CACGGCATGT TCAGAAAAAA ATAATCAAGG AGATGCGATG A
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| Protein sequence | MDHIKMNTFM FSNGERYCHV INSRTGEPLF DPNLYMMTNV RKESVSINSM EAVAGSLVLF
YRFLYMREID IVDRITRLKF LSSHEIDALA DFASENFKNR KKLSGSRGVK EPTKYSRLTF
ICHYLDWLCR YHLPHSVDVN LDDKIMRMVV DLKNKRPNSD GYRDYIPEKS LTKAQRDILF
KVVSVGSELN PFSPEVQARN RLIIVLLFSY GIRAGELLNL RISDINFASS SITIQRRAND
KSDPRVKQPL VKTRGREFTS DEEVMSELYN YIQNDRRKIK NAKKNDFLFI TYKKGNTQGK
PLSMSAYRKI INTISQCSPE LYGLTGHQLR HTWNDNFSSM SDAHDLSEVG EGQCRGYLMG
WVPGSEMEKI YNRRHIITEA NKISRHVQKK IIKEMR
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