4 homologs were found in PanDaTox collection
for query gene Rpic12D_3926 on replicon NC_012857
Organism: Ralstonia pickettii 12D



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012857  Rpic12D_3926  hypothetical protein  100 
 
 
126 aa  258  1e-68  Ralstonia pickettii 12D  Bacteria  normal  normal  0.183651 
 
 
-
 
NC_010682  Rpic_0764  fimbrial protein  43.75 
 
 
129 aa  82.4  0.000000000000002  Ralstonia pickettii 12J  Bacteria  normal  0.445184  normal  0.0124058 
 
 
-
 
NC_012856  Rpic12D_0836  Fimbrial protein  45.12 
 
 
298 aa  73.2  0.000000000001  Ralstonia pickettii 12D  Bacteria  normal  normal  0.252785 
 
 
-
 
NC_007492  Pfl01_3037  fimbrial protein  39.18 
 
 
351 aa  70.5  0.000000000008  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.130146  normal  0.538691 
 
 
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