| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0836 |
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| Symbol | |
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| ID | 8018466 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 872409 |
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| End bp | 873305 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644829615 |
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| Product | Fimbrial protein |
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| Protein accession | YP_002980809 |
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| Protein GI | 241662449 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3539] P pilus assembly protein, pilin FimA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.252785 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATCAAG GCGCCGTCGT CAAGCAACTC GCGTTTCAAA TACCTTCAAG CTTTACCGTA
CCGCGCGATG CACCCATCGG TACCGTTATC TATGAAAGCG CACCTATCAC GAACAGCGCA
CAAGACACAC CGGCCTTCAC CTGTACTGGC GCCTTCCGCT GGGGTTTGGT GAATTCGGTC
GGAGGGATTC CGCCTGCCGC TACCAAAGTC GATATGCCGA TCGGAAATAC CGGACTGGCG
TGGGGCCTCG TCTACGATAA CAAGAAGTCG ACTCCAGCAC CGCTACCCGC AGCTTCACTG
GGGATCCAAC AGGTAGCGGA CACCTACACA TTCGTGAGCA CGTCTTTCTC GTTAAGGATC
AGGAAGATTG GCCCAGTTGC GCCAGGCGCT GCCGTTGAGG CGGGGCTTCT GGGGTATGTC
AACATGAATG ACGAGTTCAA CGTCTTTATC GTTCGAACCT CCACAAAGGC AAGCGTTACA
GCCCAGAGTT GCAGGACGCC AGATGTCATC GTGCAGATGG GAGATCGGAA TCGTGTCGGA
CAATTCAAAG GTGTTGGCAC TTCGTTGGCG CCTGTGAATT TTTCGATCAA TCTGAACGAG
TGCCCCTCGG GCATTAGCAA GGTTTCTTAT CTACTGAAGC CAAACACCCA AATCTTGGAT
GCCGCGCAGT CGGTCGTCGC GCTCGACGCT GAATCGGTAG CTAAGGGGGT CGGCCTGCAG
GTTCTTGACC AGAACGGAAA GCCGGCGGTG TTGAACGAGA AGATCGCTTT TAGCGAGTAC
GACAAGGCTG GTGGAAATTT CAGTATCCCG CTAAAAGCAG CCTATCGGCA AACCGCTCCA
GTCGTTGGAG CGGGCACAGC GAATAGCTCG CTGACTTTTG TGATGAGCTA CGAGTAG
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| Protein sequence | MHQGAVVKQL AFQIPSSFTV PRDAPIGTVI YESAPITNSA QDTPAFTCTG AFRWGLVNSV
GGIPPAATKV DMPIGNTGLA WGLVYDNKKS TPAPLPAASL GIQQVADTYT FVSTSFSLRI
RKIGPVAPGA AVEAGLLGYV NMNDEFNVFI VRTSTKASVT AQSCRTPDVI VQMGDRNRVG
QFKGVGTSLA PVNFSINLNE CPSGISKVSY LLKPNTQILD AAQSVVALDA ESVAKGVGLQ
VLDQNGKPAV LNEKIAFSEY DKAGGNFSIP LKAAYRQTAP VVGAGTANSS LTFVMSYE
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